ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5972

TrivialName: PA14_34590

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_34590

PAO1 Ortholog Locus:

Sequence Length: 2082

Protein Length: 693

Start: 3073444

Stop: 3075525

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA49824.1| (X70360) carR [Azospirillum brasilense] Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 2/167 (1%)

Sequence:

ATGCGGACTCCTGGTAGGCAGCGGGGCCGTCCGGTCGACGGCTACCCTGGAGTCCGGGCCGTTGCACAGCCT
GTGCCGACCCGCGCAGGCCACTGGTTGCGCGGGTTCGCGCGAGCAGGAGGTGTTGCCGGGGCGGCAGCCTGT
TGCGCGGCTGCTGCCTGGCGGACAGTGGGGGAGGTGGCGGCAGGTCCCTCTCCCGGCGGGAGAGGGACAGGC
GCTTCAGAAGATGTAGTCGGTGGTGAGGAAGTTCGACGCGCGGTTGCGGATGATCTCGCTGACCAGGGTCTT
GTTCGCCTCGGTGTCGCGGGTCGCCACCAGGGTGCGGATGGAGAACACCCGCAGCGCGTCATGGACCGACAG
GGTGCCTTCCGCCGAATTCTTCCGGCCGTTGAACGGGTAGCTGTCCGGGCCGCGCTGGCACTGGGCGTTGAC
GTTGATCCGGCCGACCTGGTTGGCGAAGGCGTCGACCAGCCGGCCGATCTGCGCCGGGTCGTTGCCGAACAG
GCTCAACTGCTGGCCGTAGTCGGAGCGCAGGACGTAGTCGATCACCTCGTCCAGCTCGCGATAGGGCACCAC
CGGCACCAGCGGACCGAACTGCTCCTCGTGGTAGAGGCGCATGTCCGGGCTCACCGGACTCAGCAGAGCGGG
GTAGAAGAAACTTTGCCGATGCTCGCCGCCGCCCGCATTGACCACTCGTGCGCCCTTGGCCAGGGCGTCGTT
CAGCAGGCCTTCGAGGTAGTCGACCTTGCCCGGCTCCGGCAGCGGCGTCAGCGCCACTCCCGGTTCCCACGG
CATGCCCGGCTTGAGGCTGGCCAGGCGCGCGCTGAACTTGTCGAGGAACGGTTGCAGCACGCTTTCGTGGAC
GAACAGGATCTTCAGCGCGGTGCAGCGCTGGCCGTTGAAGGACAGCGCGCCGGTGACCGCCTCGTTCACCGC
GTTGTCCAGGTCGACCTGCGGCAGGACGATGCCCGGGTTCTTCGCGTCCAGGCCGAGGGCGGCGCGCAGGCG
GTGCGGGCGGGGGTGCAGCTTCTTCAGGTCGCTGGCGCCGGAATGGGTGCCGATGAAGGCGAACACGTCGAC
CTTGCCGCTGGCCATCAGCGCCGACACGGTTTCCCGGCCGCGTCCGTAGATGACGTTGATCACTCCCGGCGG
GAAGCTGTCGCGGAAGGCTTCCAGCAGCGGGCGGATCAGCAGCACGCCGAACTTGGCCGGCTTGAACACCAC
CGTATTGCCCATGATCAGCGCCGGGATCAGGGTGGTGAAGGTTTCGTTCAGCGGGTAGTTGTACGGCCCCAT
GCACAGCGCCACGCCCAGCGGCACCCGGCGGATCTGGCCGAGGGTGCCCTGTTCCAGCTCGAAACGGCTGGA
GCGGCGGTCGAGTTCCTTCAGCGCTTCGATGGTATCGACGATGTAGTCGCAGGTGCGGTCGAACTCTTTCTC
GGAGTCCTTGAGGTTCTTGCCGATTTCCCACATCAGCAGCTTGACCACCGCCTCGCGTTGCTCGCGCATCCG
CGCCAGGAAGCGTTCGACGTGCTGGATGCGCTCGGCCACCCGCAGGTTCGGCCACAGGCCCTGGCCGTGGTC
GTAGGCCCGCACCGCGGCGTCGAGCGCGGCGAGCGCGGCGTCGGCGTCGAGCAGCGGGGTGCTGCCGAGGAT
CACCTGGCGCTCGCCGTCGGCCTCGGCGAGGAATACCGGGCTGCGTACCGGCGCCAGCGGGCCGTCCCAATG
TCGCAGTTGGCCGTCGACCAGGTAGTCGCGCTGCTCGATGGGGGCGTCGGGGCGGTACTGCTCGGGAATGGT
GTCGAGGCTGGGAAACAGCGAATCGAGGTGGAGCGGGGCGGTCATGGCGGGTCCTCGAATGACGTGGGTGAA
AGGCGTGGGACTGTTGTAGCGCGGTCCAGGGTGAAGGTAAATCGTTTCAGCAGGAAAACCGTCGTGTCCTTG
CCGGAAGTCAGCCTTTGCTCCCGCTTCGCGGGGAGGCGGGAGCAAAGGCACGGTACCGTCTGGCTTCAGGCG
TCGGCGGTAGGCTCTTCGCGGGGCTGCGCCGGCGGCGGCTCAAGCAATTCCTGCTGCTCGGCATAG

Translation:

MRTPGRQRGRPVDGYPGVRAVAQPVPTRAGHWLRGFARAGGVAGAAACCAAAAWRTVGEVAAGPSPGGRGTG
ASEDVVGGEEVRRAVADDLADQGLVRLGVAGRHQGADGEHPQRVMDRQGAFRRILPAVERVAVRAALALGVD
VDPADLVGEGVDQPADLRRVVAEQAQLLAVVGAQDVVDHLVQLAIGHHRHQRTELLLVVEAHVRAHRTQQSG
VEETLPMLAAARIDHSCALGQGVVQQAFEVVDLARLRQRRQRHSRFPRHARLEAGQARAELVEERLQHAFVD
EQDLQRGAALAVEGQRAGDRLVHRVVQVDLRQDDARVLRVQAEGGAQAVRAGVQLLQVAGAGMGADEGEHVD
LAAGHQRRHGFPAASVDDVDHSRREAVAEGFQQRADQQHAELGRLEHHRIAHDQRRDQGGEGFVQRVVVRPH
AQRHAQRHPADLAEGALFQLETAGAAVEFLQRFDGIDDVVAGAVELFLGVLEVLADFPHQQLDHRLALLAHP
RQEAFDVLDALGHPQVRPQALAVVVGPHRGVERGERGVGVEQRGAAEDHLALAVGLGEEYRAAYRRQRAVPM
SQLAVDQVVALLDGGVGAVLLGNGVEAGKQRIEVERGGHGGSSNDVGERRGTVVARSRVKVNRFSRKTVVSL
PEVSLCSRFAGRREQRHGTVWLQASAVGSSRGCAGGGSSNSCCSA*

AnnotationID:5973 GeneID:5972

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 13:01:06

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11845

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29065