ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5970

TrivialName: PA14_34620

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_34620

PAO1 Ortholog Locus:

Sequence Length: 1368

Protein Length: 455

Start: 3075595

Stop: 3076962

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA46093.1| (X64876) orfA [Bordetella pertussis] Identities = 94/357 (26%), Positives = 129/357 (36%), Gaps = 78/357 (21%)

Sequence:

ATGGCTGGACTCCGGTCGGGCTGGTGCTCAGAGCACCAGCGACAGCAACAGGATGAAGACCAGGCCGACCAC
GGAGAGGATGGTCTCCATCGCGGTCCAGGTCTTGAAGGTCTCGCTGACGCTCATGTTGAAGTACTGCTTGAC
CAGCCAGAACCCGGCGTCGTTGACATGGGAGAGGATCAGCGAGCCGGCGCCGGTGGCGAGTACCAGCAACTC
GCGGTTGACGCCGGGAATCAGGTCGATCACCGGCACCACGATGCCGGCCCCGGTGATGGTGGCGACGGTGGC
CGAGCCGGTGGCGATGCGGATCACCGCGGCCACCAGCCAGGCCAGCAGGATCGGCGAGATCTGCGCGTTCAC
CGCGAGATGGCCGATGACGTCGCCGACCCCGCTGGCCACCAGCATCTGCTTGAAGCCGCCGCCGGCGCCGAT
GATCATCACGATGGCGGCGGTCGGTGCCAGGCTCTGGTCGAGCAGCCTGAGGATCTTCTTCGAGTCGAAGCC
ACGGGCGTAGCCGAAGGTATAGAGCGCCACCAGCAGGGCCAGGAGCAGGGCGCTGATCGGATGGCCGATCAT
GTCCATCCAGGCGCGGAACGCGTGGCCATCGGGGAAGGCGACGTCGGCGAAGGTCTTCAGCAGCATCAGGAA
CACCGGCAGCAGCACGGTCGCCAGGGTCACGCCGAAGCTGGGCAGGTCCTGGGTCTCGGGCTCGTGGGCGAT
CTGCTCGACCAGTTCCGCCGATGGCGTGCCGGGGATGTAGCGCGAGACCAGCGCGCCGAACAGTGGGCCGGC
GATGGCGGCGGTGGGCAGGGCGACGATCAGGCCGTAGAGGATGGTCTTGCCGATGTCGGCGCCGAACACGCC
GATCGCCAGCAGCGGGCCGGGGTGCGGCGGCACCAGACCGTGCACCGCGGAAAGGCCGGCGAGCAACGGGAT
GCCGATCTTGATCAGGGACACGCCGCTGCGCCGGGCGACGATGAACACCAGCGGGATCAGCAGGATGAAGCC
GATCTCGAAGAACAGCGGGATGCCCACCAGGAACGCGGCGAGCATCATCGACCAGTGCACCCGCTCCTTGCC
GAAGGCGCGGATCAGGGTGCGGGCGATCTGGTCGGCGCCGCCGGAATCGGCCATCAGCTTGCCGAGCATGGT
GCCCAGGGCGAGGATCACGCCGACGAAGCCGAGCACGCCGCCGAAGCCGTCCTGGAAGGATTTGACGATCTT
CTCCACCGGCATCCCCGAGGTCAGGCCGAGGAAGCCGGCGGCGATGATCAGGGCGATGAAGGGATGCACCTT
GAAGCGGGTGATCAGCACGATCAGGCCGATGATGGTCACCAGGGCGTCGAGGAGCAGGTAGGCATCGTGTGA

Translation:

MAGLRSGWCSEHQRQQQDEDQADHGEDGLHRGPGLEGLADAHVEVLLDQPEPGVVDMGEDQRAGAGGEYQQL
AVDAGNQVDHRHHDAGPGDGGDGGRAGGDADHRGHQPGQQDRRDLRVHREMADDVADPAGHQHLLEAAAGAD
DHHDGGGRCQALVEQPEDLLRVEATGVAEGIERHQQGQEQGADRMADHVHPGAERVAIGEGDVGEGLQQHQE
HRQQHGRQGHAEAGQVLGLGLVGDLLDQFRRWRAGDVARDQRAEQWAGDGGGGQGDDQAVEDGLADVGAEHA
DRQQRAGVRRHQTVHRGKAGEQRDADLDQGHAAAPGDDEHQRDQQDEADLEEQRDAHQERGEHHRPVHPLLA
EGADQGAGDLVGAAGIGHQLAEHGAQGEDHADEAEHAAEAVLEGFDDLLHRHPRGQAEEAGGDDQGDEGMHL
EAGDQHDQADDGHQGVEEQVGIV*

AnnotationID:5971 GeneID:5970

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 13:01:22

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11842

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29061