ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5967

TrivialName: PA14_34760

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_34760

PAO1 Ortholog Locus:

Sequence Length: 1323

Protein Length: 440

Start: 3088359

Stop: 3087037

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE32630.1| (BX640443) putative membrane protein [Bordetella bronchiseptica] Identities = 82/304 (26%), Positives = 105/304 (34%), Gaps = 30/304 (9%)

Sequence:

GTGGAAGGTTGGCGGGAGGCGGCGTTCATCGGCGTCTCAACTCCCCTGCAACGGCGCGCCGTCCTGGAAGAA
ATAGTCCTGCCAGGAAGCCGGCTTGTTGCGGATCGCACCGACCCGGTAGAGGAACTCCGCCAGCGGATAGGT
GTTCTTCGGCGTGACGCTGAACTCCACCTGCGGATTGGCGATGATCTTCAGCAGCGCGGCGCGGTCGATCTT
CGCCCCGGTCACCCGGATATAGGTATCGGCGGCCGCCGCCTTGTCGTTCTGGGCGAAGGCCGCCGCTTCCTT
CAGCGCCTCGACGAAGGCCCGGTAGGTCTTCGGGTTGTCCTGGCGGAACTTCTCCGTGGCGAACAGCACGGT
CGGCGAATTCGGCCCCAACAGCTCGTAGCTGTCGAGCACCACGTGGACCTTCGGGTTGGCCAGCGCCTGGTC
CTGGAACGGCGGGTTGGAGAAATGCCCGGTCAGCTCGGTGCCGCCGGCCACCAGCGCGGCGGTGGCGTCCGG
GTGCGGCAGCGCCACGGTGTACTTGTCGAGGCGGTCGAACTGCTTGTCGCCCCACTGCTTCGCCGCGGCGTA
CTGGAGGAAGCGCGACTGCACCGAAACCCCCACCGCCGGCACGGCGATGCGATCCCCGGCGCCGAAGTCGGC
GATGCTCCTGACCCGCGGGTCGTTGCTCAGCAGGTAGTAGGGGAAGTTGCCCAGCGAGGCCACCGCCTTGAC
GTTCTGGCGCCCGCGGGTACGGTCCCAGATGGTCAGCAGCGGACCGACGCCGGCACCGGCGATATCGATCGC
CCCGGACAGCAGCGCATCGTTGACCGCCGCGCCGCCGGACAGTTGGGTCCAGTCGACCTTGATTTGCAGGCC
CTCGGCCTGGCCGTGCTTTTCGATCAGGCGCTGGTCGCGGACCACGTTGAGCAGCAGGTAGACGATGCCGAA
CTGCTCGGCGATGCGGATCTCGCCCTCGGCCTGCGCCGGCCGGCTGGCCAGCAGCGTGGTGGCGAGGCTCAG
GCCCAGGCCGAGCGCGGCGACCAGGCGGGTGAAACGGGGAATGCGGTTCATGGAAACGCTCCTGGCGAAAAG
GGGGAAGCGCGCGCCGTCGTCAGAACGGCGCGTCGCCCTGGATGGTGGTGCGGTAGAGCTTGCGCCGCAGGT
GGGCCGGGCAACCGCCAGCGAGATGGATCAGCGAGCGGTTGTCCCAGAACACCAGGTCATGCGCCTGCCAGC
GATGCCGGTAGATGTGCTCGGGGCGCACGCTGTGCGCATACAGCTCGGCGAGCAGTTGGGCGCTCTCGTCGG
CCGGCAGGCCGAGGATGCGGGTGGTGA

Translation:

MEGWREAAFIGVSTPLQRRAVLEEIVLPGSRLVADRTDPVEELRQRIGVLRRDAELHLRIGDDLQQRGAVDL
RPGHPDIGIGGRRLVVLGEGRRFLQRLDEGPVGLRVVLAELLRGEQHGRRIRPQQLVAVEHHVDLRVGQRLV
LERRVGEMPGQLGAAGHQRGGGVRVRQRHGVLVEAVELLVAPLLRRGVLEEARLHRNPHRRHGDAIPGAEVG
DAPDPRVVAQQVVGEVAQRGHRLDVLAPAGTVPDGQQRTDAGTGDIDRPGQQRIVDRRAAGQLGPVDLDLQA
LGLAVLFDQALVADHVEQQVDDAELLGDADLALGLRRPAGQQRGGEAQAQAERGDQAGETGNAVHGNAPGEK
GEARAVVRTARRPGWWCGRACAAGGPGNRQRDGSASGCPRTPGHAPASDAGRCARGARCAHTARRAVGRSRR
PAGRGCGW*

AnnotationID:5968 GeneID:5967

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 12:12:55

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15816

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29055