ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5966

TrivialName: PA14_34860

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_34860

PAO1 Ortholog Locus:

Sequence Length: 1590

Protein Length: 529

Start: 3105564

Stop: 3103975

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC51420.1| (AP005957) ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Identities = 54/184 (29%), Positives = 70/184 (38%), Gaps = 27/184 (14%)

Sequence:

ATGGTAAACGCCATGAACGATCAAGCGGAAATACCGAAAACGCATATGGATAGGCCACCGCCCCGTGCGTGG
TTCTCGCCGGCCAAAGGGCCGGCCCGCGGCGCGGACCGGCCCGCCCCCTCAGCGCAGCGGCCGCCAGAGGGT
GAAGGCTACCGGCGGCGTCCAGCCGCTGTTGGAGGTGTGCGCCTGCAGGCAGAGATAGCGCAGCCCCTCATA
GGTCACCCCATCGTCGACCCGGTAGGCCTGGTTCTCCCGCCACTGCGGGAATTGCGGATCCACCGCCCCGCC
GCTGGTGCTGACCTCCAGGCCTTCGCTGGGCAGCGACTGGTTGCCCTGGGTATCGGTGGCGGTGACGAAATA
GCTGTAGCGGGTGTCCGCCGTCAGGCCGCTGTCGGTGGAACCCAGCGCGGCGCTCTGGCCAACCATGGCGCC
GTCGCGATAGAGGCTGTAGTAATCGATCGGACGCTGCCCGCTGGAGGCGTTCCAGGCCAGCACCAGGCTGGT
CTCGCCGCGCTCCAGCAGACGCAGGCCCTGCGGCGGCGCCGGGCGCTGGTCGCCGCCCTCGTCGTCATGGAT
CAGGCTGGCGTAGCGCTTGCGGAACTCCCAGTTGTAGCGCTCGCCGCGCTTGTTCAGGCCATCGTCCCAGTT
CACCGACCAGGTCATCAGGCCCTTGATCGCATGACCGGCGGCCTCCAGGCGGCGAAACGCATTGCTCACCGC
GGCGGGATCGATCACGTAGCCGGTGGCCGCCGCATCGACGTTGCTCGGCAGGCCGATGGCCAGGCGCTGCGC
CGGGATCCGCACGAAGTCGCGGCTGCCGGTGGCCAGGCTCTCGGTGAGGTAGTAGAGGAAGTCTTCTTTCAT
CGCGTCGTTGTTCTGCGCGATCCAGGCGCCCTTGCCGCCGTTCGCCTCCTGGACCCACAGGCCGTCGCCGCC
CTGGTTGTAGTACTGCGGCGCGATGAAGTCGTAGACGCCTTCCAGGGCCTGCAGATAAGGCACGTACTTGCC
GTTCTTGTGCAGATAGGGGAACTCCGGGGCCATGCTGACGATGAAGTGCTTGCCCTGCCCGGCGTAGTGCTC
GCGCACCAGCTTGAGGGCCGCCGGCAGCACCCGCTGGTTGTCGGCCAGGTCGATGGCGCTCTGCTCGAGGTC
GATGTCCAGGCCGTCGAAACCGTAGGTTTCCACCAGGCGGACGATCTCGGCGGCCAGCGCCTGCTCCTGCCC
GGCGTGCAGCTCGATGTGCGCGTCGGCGCCCCCCAGCGAGATCAGCACCGCGCGGCCCTGGGCGTTGAGCAC
GCCGACCTGCCGGCGAAACTCCGCGTCGGACAGGTTGTATGGCTGGAAGGTCGGGATGCCGCGCCCTTTCAT
GAAGGCCACGGCGACCACGTTGTACTCGCTCGGCACGTCTTCCAGCGCAATGTTGGCGAACGAGCCCTGCTG
GTAGCCGTCGGCGGCGCCGGCCGGCCAGTTGTGCCAGAAGCCCATGAGAATCTTCTTGCCGGCGATGCTCGG
CATGGCCGCCGCGGCATCTTCGCGGGCCTGGTGCAACTGGGAAAAGTCGATCCTGATCATTTACCGCTCCTC
GGATGA

Translation:

MVNAMNDQAEIPKTHMDRPPPRAWFSPAKGPARGADRPAPSAQRPPEGEGYRRRPAAVGGVRLQAEIAQPLI
GHPIVDPVGLVLPPLRELRIHRPAAGADLQAFAGQRLVALGIGGGDEIAVAGVRRQAAVGGTQRGALANHGA
VAIEAVVIDRTLPAGGVPGQHQAGLAALQQTQALRRRRALVAALVVMDQAGVALAELPVVALAALVQAIVPV
HRPGHQALDRMTGGLQAAKRIAHRGGIDHVAGGRRIDVARQADGQALRRDPHEVAAAGGQALGEVVEEVFFH
RVVVLRDPGALAAVRLLDPQAVAALVVVLRRDEVVDAFQGLQIRHVLAVLVQIGELRGHADDEVLALPGVVL
AHQLEGRRQHPLVVGQVDGALLEVDVQAVETVGFHQADDLGGQRLLLPGVQLDVRVGAPQRDQHRAALGVEH
ADLPAKLRVGQVVWLEGRDAAPFHEGHGDHVVLARHVFQRNVGERALLVAVGGAGRPVVPEAHENLLAGDAR
HGRRGIFAGLVQLGKVDPDHLPLLG*

AnnotationID:5967 GeneID:5966

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 12:12:59

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11834

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29053