ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5963

TrivialName: PA14_34950

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_34950

PAO1 Ortholog Locus:

Sequence Length: 1671

Protein Length: 556

Start: 3111873

Stop: 3110203

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE42907.1| (BX640419) putative GTP-binding protein [Bordetella pertussis] Identities = 99/381 (25%), Positives = 144/381 (37%), Gaps = 48/381 (12%)

Sequence:

GTGGTTACCTTCGCTCATCGTCCGGTACTCCCTTCGGGGTTGATGACAGGCATTGCTTACTCTCCTATTACG
TTCTGCACGCCGGGCTGTTCAGCCCGCCGCGCCGCGTTGGGCGGCGCTGAAGAAATGGCCGCTGGCCATGAC
CGAATCGCGGTTGTCCGAAGCAACAGCCTAGAACACCGTCTGGATCTTGATCCCCGCCACCAGCGCGTTGTC
GACCTCGTCGACCCCGCCCGGCTGCTTGATGTATTGCAGGTTCGGCCGCACCGTCAGCCAGTCGGTCACATG
CACCCCGTAGTACAGCTCGGCGTTGTACTCGGTGTCCTGCAGCGGCTGGTACAGCGGGTTGTCGTAGTCGTC
GATGCCGTTCACCTGGTTCACCAGGCGCTGGCGCTTCTTCACATCGTCGTTGACATGGATGCGTGCGATGCC
CAGGCCGATGTCGTCCTTCGGCCGCGCATCGAACGGACCCTTGTAGACCACCCCGAGCTGCTGGTAGTTGTC
CACCACGTTGGTCGCCTTGTCGTGGACCGTCAGGTTGGCGAACAGGCTCAACCCGCGCGAAGCATCGCCGTT
GTGCGAAGTGACCTGCTGCTGCGCCACCACCCACCAGCCATGCTTGCTGCCGCGCGACTTGAAGTCGTTGCC
GGTCAGCCCCTGCGGCTGGCCGTCGACGTCGTCGTAGACGTCATCGGCCTTCGCCGTGCTGTAGTAGTAGCC
CAGCCGGTACTCGCCCGGCAGTTGCTCGGCGCCGACCTTCGGCTGCCAGATCAGCTCCACCGGCAGCAGCGC
GCCCTTGGTCCCGCTGCCGCTCATCTTGAAGCCGTTGCCGGTCTCCAGGTTCGACGGGTTCTGCTCGTAGGC
GCCGACCTGCACGTACCAGTCCGGCGCGAAGTTGTACTTCACCCGCAACGCCCACTGGCTGACCGGCCAGTT
GTACCAGATGCTCCCCGCCCAGTTGCCCACCTGCGAGCCGCAGAAGGCCAGGTTCTGGAAATCGCAGGGGAA
GCTGTTGAAGTCCTCGCCCTCGCCGAAACGGCCGAATTTCACGTCCAGCGCGCCGTCGAAGTACTGCTGCTT
GAGCCACAGCTGGGTCAGCCGCCAGGTCTGCCCGCGGCCCCAGACCTCCTGCACCGAGCTGATGTGCCCGGC
ACGCGGGTCGCCGATGCGGTCGTTGGAAAGGTTCTTGCCATTGCGCTCGGTGACGGTGAACTGGAACTCGGT
GGCCTTCCAGCCGAGGATCTTCTCCAGGTCCATGTGCACGCCCAGGGCGAACTGGTCGGTGTAGCGCCCGGT
CTTGTCGTCGTCATAGCCGCCGTCGAGGTTGGCCGCCGCCTCGCCGACGTACTCCAGCTTGAAGTCGTAGCC
CTTCTCCAGCAGCTCGGTGCGCTTGCCGCCCCAATCGCCGAGCATCCATTTCGAGTTCGGCGAGAACGCCTC
GGCGGCGTGCGCCGCGTTGCACAGCAGGGAGGCGGACAGCAGGCTGCCCGCCACGGGGCGCAGGGCCGGACG
GAGAAGATGGGATTTCACGCGAACGCTTCCTCGTTGCGAATGGTCGACTGGCCGCATGCAGCGACCGCTCTA
CTCCCTCGATACCCTTGCCAGGAACAAGGGTATATGAAGAGGGCTCATGATCTGAGCCAAGCAGAACAATGG
TTAATTTGCGAATGA

Translation:

MVTFAHRPVLPSGLMTGIAYSPITFCTPGCSARRAALGGAEEMAAGHDRIAVVRSNSLEHRLDLDPRHQRVV
DLVDPARLLDVLQVRPHRQPVGHMHPVVQLGVVLGVLQRLVQRVVVVVDAVHLVHQALALLHIVVDMDACDA
QADVVLRPRIERTLVDHPELLVVVHHVGRLVVDRQVGEQAQPARSIAVVRSDLLLRHHPPAMLAAARLEVVA
GQPLRLAVDVVVDVIGLRRAVVVAQPVLARQLLGADLRLPDQLHRQQRALGPAAAHLEAVAGLQVRRVLLVG
ADLHVPVRREVVLHPQRPLADRPVVPDAPRPVAHLRAAEGQVLEIAGEAVEVLALAETAEFHVQRAVEVLLL
EPQLGQPPGLPAAPDLLHRADVPGTRVADAVVGKVLAIALGDGELELGGLPAEDLLQVHVHAQGELVGVAPG
LVVVIAAVEVGRRLADVLQLEVVALLQQLGALAAPIAEHPFRVRRERLGGVRRVAQQGGGQQAARHGAQGRT
EKMGFHANASSLRMVDWPHAATALLPRYPCQEQGYMKRAHDLSQAEQWLICE*

AnnotationID:5964 GeneID:5963

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 12:12:03

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15812

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29047