ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5960

TrivialName: PA14_35120

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_35120

PAO1 Ortholog Locus:

Sequence Length: 1488

Protein Length: 495

Start: 3125486

Stop: 3126973

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD16500.1| (AL646071) PROBABLE HISTONE H1 PROTEIN [Ralstonia solanacearum] Identities = 40/185 (21%), Positives = 67/185 (36%), Gaps = 3/185 (1%)

Sequence:

ATGTTCACCAGGTTCGAGACCACCAGCGGCAGGCTGGCGCTGTCGGCGATGAAGCCCGCCGCCATGACGAAG
GCCAGGGTCGCCGCCGGGCTGAAGCGCAGGGCCAGCAGCATCGACATCACGATGGGCGTGAGGATCAGCGCC
GCGCCGTCGTTGGCGAACAGCGCCGAGACCGCCGCGCCGAGCAGCACGCAGAAGGCGAACAGGCGCCGGCCG
TCGCCGCCGGCCCAGCGCGCGACGTGCAGCGCGGCCCATTCGAAGAAGCCGGCCTCGTCCAGCAGCAGGCTG
ATGACGATCACCGCGATGAAGGTGGCGGTCGCATTCCAGACGATGTTCCAGACGGTCGGGATGTCGCCCGGC
GCGACGCTGCCCAGCGCCAGGGCGAGCAGGGCGCCGATGCTGGCGCTCCAGCCGATGCCGAGGCCCCTGGGC
TGCCAGATGACCAGGACCAGGGTGAACAGGAAGATGGCGAAGGCGATCAGCATGGGGCGGCTCGCGCTATTG
GCAGCAGGCGGAGGCGCGCTGCGGGCGGCCGTCCATGTCGCGCAGGCGCGCGGCGTCGGCTTGCAGCCAGTC
GCCGTTGGCCCGCAGGGTCACTTGCAGGACTTCGTGGATCCAGGCCGGCAGCGCAGGGTTCAGGCGGTAATA
CACCCACTGGCCCTGGCGACGGTCGAGGAGCAGCCCGGCACTGCGCAACTGGGCCAGGTGGCGGCTGATCTT
CGGCTGGCTGTCGGCGAGGGCGCACATCAGTTCGCAGACGCACAGTTCGCCCTGGTCGACGATCAGCAGGGT
GGCGCGAACGCGCGTCTCGTCGGCCAGGCACTTGAACACTTCGGCGGGGCTGGGCATCGCTGGGCCTTCCTG
AATATATGGAAAGCCGAATATACGGACATCCGTATGTATTGCAAGCGCCCCCGATCCTGCCGGCTAGCGGCG
GGCGGCCTGGACTTCCTCGCTCGGCGTGCGCCCGAAGTAGCGCTTGAACTCGCGGCTGAACTGCGAGGGGCT
CTCGTAGCCGACCTGGTTGGCGGCGGTACTGGCGTTCAGCCCGTCCTGCACCATCAGGCTCCAGGCCTTGTA
CAGGCGCACGCTCTTCAGGTACTGGAGGGGCGAGGTGAAGGTCATCGCCTTGAAGTTGTGGTGGAAGGTCGA
CACGCTCATGTTCGCCTCGCGAGCCAGGGTGTCGATGTCCAGCGCACTGGCGTAGTCGGTGTGGATGCGCCG
CAGGGCCCTGGCCATGCGCCCGTAGCCGCTGTGCCGGCCGGCCACCGCACGCAGGGCGTTGCCCTGCTCGCT
GCGCAGGGCGCGGAAGATGATCTCGCGGACCAGTTGCGGGCCGAGGATATGGCTGTCCAGCGGGCTCTGCAG
GCAGCGCAGCAGGCGCATCACCGCATCGGCCATCCCCGCGTCCAGCGGTACCGAAGCCATCGGCGCGCTGGG
CGCCAGTTCGTTGTCGTCGTCGCTGCCGGGAGCCTCTTCCATCTGTAG

Translation:

MFTRFETTSGRLALSAMKPAAMTKARVAAGLKRRASSIDITMGVRISAAPSLANSAETAAPSSTQKANRRRP
SPPAQRATCSAAHSKKPASSSSRLMTITAMKVAVAFQTMFQTVGMSPGATLPSARASRAPMLALQPMPRPLG
CQMTRTRVNRKMAKAISMGRLALLAAGGGALRAAVHVAQARGVGLQPVAVGPQGHLQDFVDPGRQRRVQAVI
HPLALATVEEQPGTAQLGQVAADLRLAVGEGAHQFADAQFALVDDQQGGANARLVGQALEHFGGAGHRWAFL
NIWKAEYTDIRMYCKRPRSCRLAAGGLDFLARRAPEVALELAAELRGALVADLVGGGTGVQPVLHHQAPGLV
QAHALQVLEGRGEGHRLEVVVEGRHAHVRLASQGVDVQRTGVVGVDAPQGPGHAPVAAVPAGHRTQGVALLA
AQGAEDDLADQLRAEDMAVQRALQAAQQAHHRIGHPRVQRYRSHRRAGRQFVVVVAAGSLFHL*

AnnotationID:5961 GeneID:5960

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 09:09:49

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11822

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29040