ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5958

TrivialName: PA14_35220

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_35220

PAO1 Ortholog Locus:

Sequence Length: 2376

Protein Length: 791

Start: 3132531

Stop: 3134906

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK53451.1| (AY032926) putative PHA synthase [Streptomyces aureofaciens] Identities = 169/566 (29%), Positives = 185/566 (32%), Gaps = 133/566 (23%)

Sequence:

TTGACATACGCTGCGTATGTTAATTTCGTCTTCTCCCGTCGTCGCCGGTTCCGCTGGAGCCGGCCAGCCGAG
GCTTTCCATGAGCAACCCCTATCTCGAACTGTTCGCCGCGCCCGGCGCCAAGGGCTTTTCAGCCGCCGGCCT
GCTGGCGCGGATGCCCCTGTCGATGACCGGCCTGGGCATCGTCACCATGCTTTCCCAGGTGCATGCCGACTA
CTGGCTGGCCGGTACCGTGGCGGCCACCTTCGTGTTCTGCAATGCCTTGCTCGCGCCGCAGGTATCGCGCCT
GGTGGACCGCTTCGGCCAGGGCCGGGTGCTGCTCCCGGCCGCTCTGGCCAGCGCCCTGGCGATGAGCGCGCT
GTTGCTGTGTACGCACTATCGAGCGCCGAATGCCTGGCTCTACCTGTTCGCCTTGCTCGCCGGGGCGATGCC
GAGCATGCCGGCCATGGTGCGGGCGCGCTGGACCGAGCTGTACCGGGGCTCGCCGAAGCTGCACACGGCGTT
TTCCTTCGAATCGGTGATGGACGAGGTGTGCTACATCATCGGGCCGGTGCTGGCGGTGAGCCTCAGCGTCGG
CTGGTTCGCCGAGGCGGGGCCGCTGCTGGCGACGCTGTTCCTGGTCGCCGGGGTGAGCCTGTTCAGCCTGCA
ACGCGGCACCGAACCGCCGCTGCATGCCCATCCGCGGCGCCGCGCCGGCAGCGCGCTGGCCTATCCGGCGGT
ACGCGTGCTGGCGCTGGTGCTGGCCGCCATCGGGGTGATCTTCGGCGCGGTGGAAGTGGTCAGCGTGGCCTT
CGCCGAGGCGCACGGCAACAAGGCTGCGGCAAGCCTGGTGTTGTCGGTCTATGCCGTCGGCTCATGTCTCGC
GGGATTGCTGTTCGGGCTGCTGCGCTGGCGCCTGGCGCTTTCCCGGCAATTGCTCAGCATGGTTACGCTGAT
GGCCCTGAGCCTGATGCCGCTGCTAGGGGTGGAGAGCATCCTTGCGCTTGCCCTGACCGTGCTGGTGGCCGG
TTTCAGCGTGGCGCCGACGATGATCCTGGCCATGGGCCTGGTCGAGCGCGCGGTGGACCCGGCACGCCTCAC
CGAAGGCCTGACCTGGGCCATCACCGGGCTGGGCATCGGCATGGCCCTGGGCTCGGCGCTGGCCGGTTGGGT
GGTGGAGGGCTACGGCGCCGCCAGCGGTTTCCTCGTCGCGGTCGGCGCCGGCTGGCTGGCCTGGCTGCTGGC
CCTGGCCTGCTTCCGGGTGCTGGCTCAGGACGAGGCCGGAGACTGCGCGGTGTCCGGCTGAGCCGGGAAGGC
GTATTCGCGTTCGACCCGGGCGATCCGCGCGCTGAAACCGGCGTACCAGTCGCGCCGGCCGCGCGCCTGGGC
GTCGCGGTGCTCCGCGTGGCGGCTCCAGGCACGGATCGCCGCCTCGCTGTCCCAGTAGGAGACGGTGATGCC
GAAACCGTCGGCGCCGCGGACCGACTCCACGCCGAGATAGCCCGGCTGGCGGCTGGCCAGTTCCAGCATGCG
CTCGGCCGCTTCGGCGTAGCCGTCGTCGACGGCGCTGCGATGGGAGCTGAAGATCACTGCGTAATAAGGTGT
CGGGCCGCGCCGGGGGCGGTCGCGGCGCTGCGTCCGGCACGCCTCGACGAATGCCTTCGGCAGTGGCGGCAG
GACGCCGGCCAGGGCTGCCCGCTCGGGTTGGAACAGGGTGGCGACGAAGAACGGATGCTGTTCCAGCTCCAC
CGCGCGGATCGCTCCGTCGGCGCTCCAGGCGCTGGCCCGCAGTGCGCCGCCGGTAAGTTCCGCGGCGAAGCG
CGGGGCGATTGCGTAGCGGCAGTGGTAGTCCGCCTCGATCCAGTCGGCAGCATACGCCAGGGCCAGGCGCGA
GCCGCGCAGCAGGCGGACTTCCTCGCGGGCTTCGAGCAGAGCGCAGGGCAGGGCGGCGATCACCGCCTGGTC
GCTGTGCGGATGCTCCTCGCCATGGGTCGCCGCCTGCCAGCCGAGGGCGTTGCGGGCGAACTCGAGGATCGT
GTGCTGGAAGCCGGCGCAGGTACCGAGGAACGGCCGGCGCCGGCCCCGGGCATGGGCGATCAGGCGCAGCAC
CGCGTCGGCGTCGCGATAGGGGCTGCCCGGCACGCACCAGAACCCGTCATAGCGCTCCAGCGCCGGCTCGGC
GGGCAGGCGGTCGCTGGCCAGCCAGTCGAATGCGATCTCCAGGCCGAGTGCCTCGCCGGCCAGGCGCAGGGC
CAGGGGAATCGCCCGGTGGGCGGTGATGTGCGGGTCGTGGTCGCCGACCAAGGCAATGCGCAGCGGCGCCGC
GGGAGGGGTGGACATCCGTTTTCGCTCCAGTTTCGCCACGCCGGTTGGCGGGCCCTGGCGCTCACTCTATAG

Translation:

MTYAAYVNFVFSRRRRFRWSRPAEAFHEQPLSRTVRRARRQGLFSRRPAGADAPVDDRPGHRHHAFPGACRL
LAGRYRGGHLRVLQCLARAAGIAPGGPLRPGPGAAPGRSGQRPGDERAVAVYALSSAECLALPVRLARRGDA
EHAGHGAGALDRAVPGLAEAAHGVFLRIGDGRGVLHHRAGAGGEPQRRLVRRGGAAAGDAVPGRRGEPVQPA
TRHRTAAACPSAAPRRQRAGLSGGTRAGAGAGRHRGDLRRGGSGQRGLRRGARQQGCGKPGVVGLCRRLMSR
GIAVRAAALAPGAFPAIAQHGYADGPEPDAAARGGEHPCACPDRAGGRFQRGADDDPGHGPGRARGGPGTPH
RRPDLGHHRAGHRHGPGLGAGRLGGGGLRRRQRFPRRGRRRLAGLAAGPGLLPGAGSGRGRRLRGVRLSREG
VFAFDPGDPRAETGVPVAPAARLGVAVLRVAAPGTDRRLAVPVGDGDAETVGAADRLHAEIARLAAGQFQHA
LGRFGVAVVDGAAMGAEDHCVIRCRAAPGAVAALRPARLDECLRQWRQDAGQGCPLGLEQGGDEERMLFQLH
RADRSVGAPGAGPQCAAGKFRGEARGDCVAAVVVRLDPVGSIRQGQARAAQQADFLAGFEQSAGQGGDHRLV
AVRMLLAMGRRLPAEGVAGELEDRVLEAGAGTEERPAPAPGMGDQAQHRVGVAIGAARHAPEPVIALQRRLG
GQAVAGQPVECDLQAECLAGQAQGQGNRPVGGDVRVVVADQGNAQRRRGRGGHPFSLQFRHAGWRALALTL*

AnnotationID:5959 GeneID:5958

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 07:07:51

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15804

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29036