ViewGene
Locus Name:
GeneID:
Location:

GeneID:5954
TrivialName: PA14_35350
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_35350
PAO1 Ortholog Locus:
Sequence Length:894
Protein Length:297
Start: 3143207
Stop: 3144100
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCCATGGTCTCGCCGAAGCAGAGGATCTCGAAGTCAGCCATGCTGGCGTTCCTCCTGGGGATGGCCGAG
GCGGGCGAGGGCGGCGATGTGCCGGCGGCTGAGACTGAGCAGGTCGTCGCCCTGCAGCGGGTATTCGATGGC
CCGCGCCACGCCTTCCGGGAAATGCTGCAGCAGGCGCTGCCAGTACTGCAGGTCGGCGGCCGACGGCGGTAC
CGCGACCAGCTTGCCGTCGCGGTTGCGGATCACCGCCTTGCAGTGCACGTAGCCGACGTAGCGGCCCAGGCG
CAGGGCGGCATCGTCCACCGCCTGCTCCTGCCAGCGCCAGTTGCCGATGTCGAAGGTCATCGCCAGGTCCAG
TTGCTGGCGCTCGGCGAGGCGGAAGAAGCGTTCCAGCACATCGATCCGGCCGCCCTGGGGCGTCTGGTCGTT
CTCCACCAGCAGTTGCAAGCCGTGGCGCGCCAGGCGCCGGGCGAGGGCGGCGAGGTCGGGCTGTTCCGGCAG
ATGACCGAGCGAGACCTTGAGCCAGCCGGCCCCGCAGGCTTCGGCGCGGCGCAGGGTCGGCTCCAGCTCGGG
GTTCAACTGGCCGTCTTCGCGCCACAGCTCGAGGGGCGAGGAGAACACGCATTCCAGCCCCTGCAACTGGAT
GGCGGCGGTCAGCGCTTCGGTATCCGGCGGGCCGGCGAAGAGTTCCTCGCGCAGTTCCACGCGCTGCGCGCC
GGCCATCCCCAGCAGGGGCAGGAAGCTGGCCTGGCCGCGACTGCGAACGAGGTCCGCGCCGTAGCTGGAAAG
ACTGATGGAGACAGGGTGAAGGGACATTGGCGATCCTCTGAAACCGGTTTCATTTCAGGCCGTGCGAAAGCC
GCCGGCAACGCGCCGGCGGCAGGCCGCTAG
Translation:
MAMVSPKQRISKSAMLAFLLGMAEAGEGGDVPAAETEQVVALQRVFDGPRHAFREMLQQALPVLQVGGRRRY
RDQLAVAVADHRLAVHVADVAAQAQGGIVHRLLLPAPVADVEGHRQVQLLALGEAEEAFQHIDPAALGRLVV
LHQQLQAVARQAPGEGGEVGLFRQMTERDLEPAGPAGFGAAQGRLQLGVQLAVFAPQLEGRGEHAFQPLQLD
GGGQRFGIRRAGEEFLAQFHALRAGHPQQGQEAGLAATANEVRAVAGKTDGDRVKGHWRSSETGFISGRAKA
AGNAPAAGR*
AnnotationID:5955GeneID:5954
AnnotatorUID: diggins
Modification Date/Time: 2005-03-04 07:07:51
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:11810




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29028




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48956How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 1810709Stop: 1809816

          
Length: 894


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGCCATGGTCTCGCCGAAGCAGAGGATCTCGAAGTCAGCCATGCTGGCGTTCCTCCTGGGGATGGCCGAG 
GCGGGCGAGGGCGGCGATGTGCCGGCGGCTGAGACTGAGCAGGTCGTCGCCCTGCAGCGGGTATTCGATGGC 
CCGCGCCACGCCTTCCGGGAAATGCTGCAGCAGGCGCTGCCAGTACTGCAGGTCGGCGGCCGACGGCGGTAC 
CGCGACCAGCTTGCCGTCGCGGTTGCGGATCACCGCCTTGCAGTGCACGTAGCCGACGTAGCGGCCCAGGCG 
CAGGGCGGCATCGTCCACCGCCTGCTCCTGCCAGCGCCAGTTGCCGATGTCGAAGGTCATCGCCAGGTCCAG 
TTGCTGGCGCTCGGCGAGGCGGAAGAAGCGTTCCAGCACATCGATCCGGCCGCCCTGGGGCGTCTGGTCGTT 
CTCCACCAGCAGTTGCAAGCCGTGGCGCGCCAGGCGCCGGGCGAGGGCGGCGAGGTCGGGCTGTTCCGGCAG 
ATGACCGAGCGAGACCTTGAGCCAGCCGGCCCCGCAGGCTTCGGCGCGGCGCAGGGTCGGCTCCAGCTCGGG 
GTTCAACTGGCCGTCTTCGCGCCACAGCTCGAGGGGCGAGGAGAACACGCATTCCAGCCCCTGCAACTGGAT 
GGCGGCGGTCAGCGCTTCGGTATCCGGCGGGCCGGCGAAGAGTTCCTCGCGCAGTTCCACGCGCTGCGCGCC 
GGCCATCCCCAGCAGGGGCAGGAAGCTGGCCTGGCCGCGACTGCGAACGAGGTCCGCGCCGTAGCTGGAAAG 
ACTGATGGAGACAGGGTGAAGGGACATTGGCGATCCTCTGAAACCGGTTTCATTTCAGGCCGTGCGAAAGCC 
GCCGGCAACGCGCCGGCGGCAGGCCGCTAG