ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5948

TrivialName: PA14_35580

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_35580

PAO1 Ortholog Locus:

Sequence Length: 1761

Protein Length: 586

Start: 3161765

Stop: 3163525

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK20156.1| (AY027524) hypothetical protein [Frankia sp. CpI1] Identities = 109/449 (24%), Positives = 144/449 (32%), Gaps = 42/449 (9%)

Sequence:

ATGCTTGGGTTCCGAAGGAAAGCTTGCCTGTTTAGGCCGCTGCGCCCGTTGGAACGTTCAACCGCGCTGCGC
TTGCTCCTGCTCGTAGCCGATGGCGCCGGCGATGTGGCGTCCGGCGATGTAGCCGAAGGTCAGCGCCGGTCC
CAGGTTGATGCCGCCGGCGGGATAGTGGCCGGCGAACAGACTCGCCATGTCCGCGCCCGCCGCGTACAGGCC
GGGGATCGGCTGGCCGCCGCCGTCCAGCACGCGGGCCTGGGCGTCGGTCTTCAGCCCGGCGAAGGTACCGAA
GCAGCCGGGCTCGACCTGCACCGCGTAGTACGGTCCGCGTTCGATGGGGGCGACGCAGGGATTCGGCCCCGG
ATACGCCGGGTCGCCCTGCTTGCGGTTGAATGCCGTGCCGCCGCGGCCGAACTCTGGGTCGCGGCCCTCGCG
GGCGTGGCGGTTGTATTCGGCGACGGTGGCGGCCAGGCCGGACGGGTCGATGCCGCAGCTCCTTGCCAACTG
ATCCAGGCTGGCCCCGCGCTTGAGATAGCCGCTGCGCAGGTGCGCGGTGATCGGCAGCGGCGCCGGACGCAC
GTAGCCGAGGCCGTAGCGGCGCAGGAAGCGCCGGTCGCAGACCAGCCAGGAGCGTGCCGGCTGCCCGGGCGG
GGTGGCCTCGAGCAGGGCGGCGACATAGTCGTGGTAACCGTGGGCCTCATTGACGAAGCGCCTGCCGTTGGC
CAGTACGCCGATCACCCCGGGCTTGCCGCGCTCGATGATGTGCGGGAAGTGCCCGGTCTCGCCATCGCCGTG
GGGAACTCGCGAGACCGGCGCCCAGGCGATCGGCGAGCGCAGGTCGTCGGCCACCCGGCCGCCGGCGCTTTC
CCCCaggcgCAAGCCGTCGCCGTTGCAGCCCGGCGGCGGCAGCGGCAGCAGGGTGTCCAGGGTAGGGGCCag
cGCGGCGCGGCGCTGCGGATCATGGGGAAAGCCGCCGCAGGCCAgGACCACGGCGCCTGCCTCGATGCGCAG
GAGTCCCTCGGCGCTCTCGACCAGCGCGCCGACCACCTTGCCGTCACGCATCAGCAGTTCGCGGGCTGGCGC
CGATTCGATCAGGCGCACACCCAGGGCTTCGGCGGACTTGGCCAGGCGCGCTACCAGGGCCACGCCATTGAC
CAGGTGCATGGCGCGACCGTAGCGCAGCAGGTGCCAGAGGTGGCTGGAAAAGCGCCGGGCGACATGCAGGAA
GGCCGGCAGCGAGCGGGTCAGGTCGAGGAAGGCGGCGAGGTCGGCGCCGGCCATGATCGGCATGCCCATGAA
CGAGGTCTCCCGCAGGGTCTTGCGCAGGCGCGGCAGCAGCGGGCCCAGTTGTCGTGCGTCATAGGGCGCGGC
GACCAACTGGTGGCCGCCCTCGGCGGCGCCCGGCGTGTCGCCATGCATGTCCGGGATGCCGTTGCCGTCGAC
GAACCGCAGGTGGGTGTGGCGCTCgaAGaAGGCCACCATGTGCGGGCAGGCTTCGAGGAAGGCGTCGATCCG
CGCGGCGTCGTAACGCTCGCCCAGTTCGTGGCGCAGGTAGGTACGCGGTTGCTCGATGTCCTCCTCGATACC
GGCGCGACGCGCCAGCGGGTTGCGCGGCAACCAGGCCCAGCCGCCGGACCAGGCGCTGGCGCCGCCGAACAC
CGGGTCCTTCTCCACCAGGACTACCCGGCGCCCGTGCCAGGCCGCGGTCACCGCCGCCGCCAGCCCGGCGGC
GCCGGAGCCGACGACCAGCACGTCACAGGTTAG

Translation:

MLGFRRKACLFRPLRPLERSTALRLLLLVADGAGDVASGDVAEGQRRSQVDAAGGIVAGEQTRHVRARRVQA
GDRLAAAVQHAGLGVGLQPGEGTEAAGLDLHRVVRSAFDGGDAGIRPRIRRVALLAVECRAAAAELWVAALA
GVAVVFGDGGGQAGRVDAAAPCQLIQAGPALEIAAAQVRGDRQRRRTHVAEAVAAQEAPVADQPGACRLPGR
GGLEQGGDIVVVTVGLIDEAPAVGQYADHPGLAALDDVREVPGLAIAVGNSRDRRPGDRRAQVVGHPAAGAF
PQAQAVAVAARRRQRQQGVQGRGQRGAALRIMGKAAAGQDHGACLDAQESLGALDQRADHLAVTHQQFAGWR
RFDQAHTQGFGGLGQARYQGHAIDQVHGATVAQQVPEVAGKAPGDMQEGRQRAGQVEEGGEVGAGHDRHAHE
RGLPQGLAQARQQRAQLSCVIGRGDQLVAALGGARRVAMHVRDAVAVDEPQVGVALEEGHHVRAGFEEGVDP
RGVVTLAQFVAQVGTRLLDVLLDTGATRQRVARQPGPAAGPGAGAAEHRVLLHQDYPAPVPGRGHRRRQPGG
AGADDQHVTG*

AnnotationID:5949 GeneID:5948

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 06:06:35

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11799

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29016