ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5947

TrivialName: PA14_35610

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_35610

PAO1 Ortholog Locus:

Sequence Length: 1380

Protein Length: 459

Start: 3166255

Stop: 3164876

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC70262.1| (AP005031) putative translation initiation factor IF-2 [Streptomyces avermitilis MA-4680] Identities = 95/329 (28%), Positives = 107/329 (32%), Gaps = 29/329 (8%)

Sequence:

GTGCCTGGGCTTCGCCCGCGAATGGCTGCTGGTGGCCTCCTGGGGCGCCGGCGAGCGCAGCGACGCCTTCCT
CATCGCCCTGTTCCTGCCCGAGGCCCTGCGCATGTCGCTGGCCGGCGGCGTGCTCAGCGCTGCGGCCCTGCC
ACTGTTCCTCGAACGCCAGGGCGAACGTCGCCTCGACTGGCTGGCGGCGATCCTCCCGGCGCTGCTCGGTAT
CGCCGTGGCGCTCAGCCTCCTGCTGCTGGCGGCGGCGCCCTGGCTGGTGCGCTTGCTCGGCCCGGGCCTGGC
CGAGACGGCCAGCGCCCAGGCCGCGGCCAACTTGCGGATCCTCGCCTGGTGCGTGCCGGGACTGATGCTCCA
TGCGCTGTTCAGCATCCCCCTGCAGGCCGCCGAGCGTTTCGTCCTGGCTGGGCTCGGCTCGCTGCTGTTCAA
CCTGCCGCCGGTGCTCTACCTGGCCTTGCACGGCCAGGCCAGCCAGCCCGAACAACTGGCCCTGGCCTGCCT
GCTCGGCAGCCTGCTGATGCCGCTGGTGCTGCTGCCTTCGCTATGGATCGAGGGCTGGCGGCCCTGGCACTG
GCGCCTGTCCGGCGTCGAACTGGGCGAGCTTGGCGGGCGCATCGGTCCGCTGTTGCTGAGCAACGCCGCCAG
CCAGGGCCTGGCGCTGGTCGAGCGGCTGGTGGCGTCGCTGCTCGGCGAAGGCGCGGTGACCTGGGTCAACCT
GGCGCGCAAGCTGATGAACCTGCCGCTGATCGCCCTGATGAGCCTCAACCAGGTGTTGCTCGGCATGATGAG
CCGACGCCAGGGTGGCGAGCGCCTGGCCCTGCTTCGCCGCGGCCTGGAGACCGCCAGCCTGCTGACCCTGCC
GGCCGGGGTCGGGCTGGTCGCTGCCGCACCCGGCCTGGTGGCCCTGTTGCTGCCGCAGCAGACCGCCGGCTC
GCCGTTGCCGGCGCTGCTGGCCTGGTTCGCCGTGCCACTGGTGTTCGGCGCCTGGAATGCCTTGCTGGCGCG
TTACGCCTACGCCGCCGGCGATACTCGCCTGCCGCTGCGCTGCGAGCTGCTCGGCAGCGCGCTGAACGCCGC
GCTGCTGGCGGTCCTGCCGTTGATTTTCGGACTGCCAGGGATTCCCCTCGCGGCCCTTGGCGGGGTGCTCTG
CACCGCGCTGCTGCTGATGCGTCGCCAGGCCCTGCTCGGCGCCCTGCCCTGGGCCCGGCTGTGGCTACTGAG
CGCCCTGGCCATGGCGCTCGCCGCCGGCCTGCTGTTCCGCATCGACGGTATCTGGCTGCAACTGGGCCTGGG
CACCGTCGCCGGCTGCCTGGCGCTGCTCGGCATGGCGCTCTGGCTGCGGCCCTGGCGCACCGATTGACCCAT
GGCTCCGGGTAG

Translation:

MPGLRPRMAAGGLLGRRRAQRRLPHRPVPARGPAHVAGRRRAQRCGPATVPRTPGRTSPRLAGGDPPGAARY
RRGAQPPAAGGGALAGALARPGPGRDGQRPGRGQLADPRLVRAGTDAPCAVQHPPAGRRAFRPGWARLAAVQ
PAAGALPGLARPGQPARTTGPGLPARQPADAAGAAAFAMDRGLAALALAPVRRRTGRAWRAHRSAVAEQRRQ
PGPGAGRAAGGVAARRRRGDLGQPGAQADEPAADRPDEPQPGVARHDEPTPGWRAPGPASPRPGDRQPADPA
GRGRAGRCRTRPGGPVAAAADRRLAVAGAAGLVRRATGVRRLECLAGALRLRRRRYSPAAALRAARQRAERR
AAGGPAVDFRTARDSPRGPWRGALHRAAADASPGPARRPALGPAVATERPGHGARRRPAVPHRRYLAATGPG
HRRRLPGAARHGALAAALAHRLTHGSG*

AnnotationID:5948 GeneID:5947

AnnotatorUID: diggins

Modification Date/Time: 2005-03-04 06:06:04

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15794

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29014