ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5939

TrivialName: PA14_35870

AnnotatorUID: ericdeziel

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_35870

PAO1 Ortholog Locus:

Sequence Length: 1440

Protein Length: 479

Start: 3193792

Stop: 3192353

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA49824.1| (X70360) carR [Azospirillum brasilense] Identities = 56/166 (33%), Positives = 76/166 (45%), Gaps = 1/166 (0%)

Sequence:

GTGCTTGAACATCACGTGGCGCACCACGGTGTAGTCTTCCAGGCCGTACATCGACAGGTCCTTGCCGTAGCC
GGACAGCTTGACCCCGCCGTGGGGCATTTCGCTGACCAGCATGAAGTGGGTGTTGACCCAGGTGCAGCCGTA
TTGCAGGCGGGCGGCCAGGCGATGAGCGCGCCCCACATCGGCGGTCCATACCGAAGACGCCAGGCCGTAGTC
GGAGTCGTTCGCCCAAGCCAGCGCCTGGGCTTCATCCTCGAACGACGAGACGGTCACCACCGGGCCGAAGAT
CTCGCGGCGCACCACCTCATCCTCCTGTGTAGCGCCGGCCAGGACCGTCGGCTCGAAGAAGAAGCCGGCACC
CTCGGCGCGCTTGCCGCCGGTGACCACTTCGATGTGCGGCAACTCCCTGGCCCGGTTCACGAACCCCTCGAC
ACGCTCCAGATGCTCCTTGGTGATCAGCGGTCCCATCTCGGTCGCCGGATCGTCCGGCAGCCCGCACCGGAT
GCTGGATACGGCCTCGCCGAGCTTGCGAACGAACTCCTGGTAGACCCCTTTCTGCACATAGAGGCGGCACGC
GGCGGTACAGTCCTGGCCGGCGTTGTAGAAGCCGAAGGCGCGGATGCCTTCGACGGCGGCGTCGATGTCGGC
ATCGTCGAAGATCAGTACAGGAGCCTTGCCCCCCAACTCCATGTGCATGCGTTTCACGCTCTCGGCCGTACC
TTCGATGATCCGGCTGCCGGTGCGCACGGAGCCGGTCAGCGACACCATGCGCACCTGGGCATGGCTGGTCAG
CGGCTCACCCACCGAGGCACCTCGACCGTGGACGATGTTGACCACGCCGGCGGGGAAGATCTCGGCAAGCAG
CTCGCCCAGTTTCAAGGTACTCAGCGGCGTGTGCTCCGACGGTTTCAGCACCACGGTGTTGCCGCCGGCCAA
TGCCGGGCCGAGTTTCCACGCTGCCATCAACAACGGATAGTTCCACGGCGCGATGGAGGCGACCACGCCTAC
CGCGTCGCGGCGGATCATCGAAGTATGCCCCGCGACGTACTCTCCCGCCGCCGAGCCCTGCAGGCAGCGCAC
GGCGCCGGCAAAGAAACGGAACACGTCCGACACGGCGGGCAGTTCGTCCAGCAGCACGGCGTTGAAAGGCTT
GCCGCAGTTGTCCGCCTCCAGGCGAGCGAACACGTGCGCCTGGGCATCGATGCGCTCGGCAAGCTTGAGCAG
CAGGGCCGCGCGATCCTTGGGCGGCGTTTGCGACCAGGCGTCGAAGGCCGCATCCGCGCTCTGCACCGCGGC
ATGGACCTGGGCGCCGCTGGCCTCGGTAATTCGCACCAGGACGTTGCCCTGGGACGGGTTGTACACCGCGTG
GCTCTCGCTTTCGCCGGCCACCAGGGCACCATTGATCAGAAGTTTGGTTTGCATATCGATTCTCGCCATTGA

Translation:

MLEHHVAHHGVVFQAVHRQVLAVAGQLDPAVGHFADQHEVGVDPGAAVLQAGGQAMSAPHIGGPYRRRQAVV
GVVRPSQRLGFILERRDGHHRAEDLAAHHLILLCSAGQDRRLEEEAGTLGALAAGDHFDVRQLPGPVHEPLD
TLQMLLGDQRSHLGRRIVRQPAPDAGYGLAELANELLVDPFLHIEAARGGTVLAGVVEAEGADAFDGGVDVG
IVEDQYRSLAPQLHVHAFHALGRTFDDPAAGAHGAGQRHHAHLGMAGQRLTHRGTSTVDDVDHAGGEDLGKQ
LAQFQGTQRRVLRRFQHHGVAAGQCRAEFPRCHQQRIVPRRDGGDHAYRVAADHRSMPRDVLSRRRALQAAH
GAGKETEHVRHGGQFVQQHGVERLAAVVRLQASEHVRLGIDALGKLEQQGRAILGRRLRPGVEGRIRALHRG
MDLGAAGLGNSHQDVALGRVVHRVALAFAGHQGTIDQKFGLHIDSRH*

AnnotationID:5940 GeneID:5939

AnnotatorUID: danlee

Modification Date/Time: 2005-07-29 11:11:43

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15790

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28998