ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5934

TrivialName: PA14_35960

AnnotatorUID: ericdeziel

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_35960

PAO1 Ortholog Locus:

Sequence Length: 1638

Protein Length: 545

Start: 3200785

Stop: 3202422

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAL51834.1| (AE009507) periplasmic component of efflux system [Brucella melitensis 16M] Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 11/116 (9%)

Sequence:

GTGGCGCCTGGCGCCTGGCGGTCACCACCACCTCGACGCCTGCGGCGGCCAGGGTCATGGCGAAGTGGCGGC
CAaggCCGCTTGAGGCGCCGGTCACCAGGGCGCGGCGCCCGTCGAGGGCGAACAGTCGGGCAAGGTTCGGTT
GCATCAGTGGGCCTCCAGGCGCTGGTCGAGCAGCTTCTTCGCCAGGCTCATGCGGTGCACCTCGCTCGGGCC
GTCATAGATGCGGAACGGGCGAATGTCGCGGAAGATCCGCTCCACCACGGTCTCCCCGGTCACCCCGCGCCC
GCCCAGTACCTGGACGCAACGATCGACCACCCGCCACAACGCCTCGGCGCTGATCACCTTGGCCATGCTGGA
GTCGACATTGGCCCGCCGGCCCTGGTCGAGCACCCAGGCGCAGTGCCACACCGCCAGGCGCACCACGTGCAG
GTCCATCATGTTGTCGGCCAGCATGAAGCCCACACCCTGGTGCTCGCCCAGCGGCTTGCCGAAGGCATCTCG
GGTGCGCGCATAGTCGCAGGCGATGTCGTGGGCACGGCGCGCGGCGCCCAGCCAGCGCATGCAGTGGGTCAA
GCGCGCGGGCGCGAGGCGCACCTGGGCATAGCGGAAGCCCTTGCCGATCTCGCCGAGCACATCGCTCGCCGG
AATACGCAGGTTGTCGAAACGCAGCTGCCCGTGGCCACCGGTGAAGCAGCTGTCCAGCGAGTCCAACTGGCG
CTCATGGATGATGCCGTCACGCTTCATGTCGGTCAGGAACATGGTCGCCGTACCATCCTCCATGCGCGCCAT
GACGATGCCGAAGTCAGCGCCTTCTGCGCCGGTGATCAGCCACTTGCGGCCATTGATCAGGTAGTCGTCGCC
ATCGCGGATGGCGGTGGTGCGCAGCATCGAAGGGTCCGAGCCGGAGCCTGGCGCAGGCTCGGTCATGGCGAA
GCAGGAACGGGCATGGCCCTGGACCAGCGGGCGCAACCAGCGGTCTTTCTGCGCCTCGGTGGCGACCACGTC
CATCAGGTGGATGTTGCCTTCGTCCGGGGCATGGATGTTCAGCGCCACCGGGCCCAGCGGCGAGTAGCCGGC
CTCTTCGAAGACGATCGCCTTGGCCACGTGGCTCAGCGCCAGGCCACCCATTTCGCGGCTGGCGTGGGGCGT
CAGCAAGCCGGCCGCGCGGGCGCGGGCCACCAGATCCTGGCGCAGGGCGTCGCTGGGGCCGTGGCTGTCCTG
GCGGGGGTCGTTCTCGAGCGGGATGACCTGTTCGGCGATGAAGTCTCGGGTCTTGGCCTGCAAGGCGAGCAG
TTCGTCCGGGAGGGTGAAGTTCATGGTTGTCCTTCTGGGTGCTTGTCTGTCGGGAATGAGATGGCTGACGCC
GTTCAGGGCAAGGCCTTGGGATTGCTGATGGCCAATCGGGCGAGGGTGACCTGGCGCAATGTCTCGACCAGG
GTTCTATGGTTTTGCGGGGCGTCATGGCTGCCCAGGCGAATGGCCCGTGCCAGTTGGCGGCGCAGGTCGGGC
AAGGCTGCGGGCGCCTCGTCGACCAAGGCGGCCAGACGTGTCCGCTCCTGGTCCTCGGCCAGAGCCACCAGG
CGGCTTTCGCGGGCTGCGATGGCCATGGCATTGGCGATCATCAGGGCCGGGTAA

Translation:

MAPGAWRSPPPRRLRRPGSWRSGGQGRLRRRSPGRGARRGRTVGQGSVASVGLQALVEQLLRQAHAVHLARA
VIDAERANVAEDPLHHGLPGHPAPAQYLDATIDHPPQRLGADHLGHAGVDIGPPALVEHPGAVPHRQAHHVQ
VHHVVGQHEAHTLVLAQRLAEGISGARIVAGDVVGTARGAQPAHAVGQARGREAHLGIAEALADLAEHIARR
NTQVVETQLPVATGEAAVQRVQLALMDDAVTLHVGQEHGRRTILHARHDDAEVSAFCAGDQPLAAIDQVVVA
IADGGGAQHRRVRAGAWRRLGHGEAGTGMALDQRAQPAVFLRLGGDHVHQVDVAFVRGMDVQRHRAQRRVAG
LFEDDRLGHVAQRQATHFAAGVGRQQAGRAGAGHQILAQGVAGAVAVLAGVVLERDDLFGDEVSGLGLQGEQ
FVREGEVHGCPSGCLSVGNEMADAVQGKALGLLMANRARVTWRNVSTRVLWFCGASWLPRRMARASWRRRSG
KAAGASSTKAARRVRSWSSARATRRLSRAAMAMALAIIRAG*

AnnotationID:5935 GeneID:5934

AnnotatorUID: danlee

Modification Date/Time: 2005-07-29 11:11:22

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15783

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28988