ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5920

TrivialName: PA14_36430

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_36430

PAO1 Ortholog Locus:

Sequence Length: 2307

Protein Length: 768

Start: 3244687

Stop: 3246993

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC70262.1| (AP005031) putative translation initiation factor IF-2 [Streptomyces avermitilis MA-4680] Identities = 104/360 (28%), Positives = 121/360 (33%), Gaps = 45/360 (12%)

Sequence:

ATGGATCAGCAGGTCGGTCATCCCGCGCAGCAGGTCGGGGATCGCGCAGGGCTGCGGATCGAGACGCTGCTT
GCGGGCGAAGGAAAGCATCCGCTGGGTCAGGTTGGCGCCGCGCTGGGCGGCCTCCAGGGCGTTCTGCAAGAG
GTCGGCGGTGCGCTGGTCGCCGGGCAGGCGTTTCTTCAGCAGCCCGAGGCTGCCGATGATCACCGTCAGCAG
GTTGTTGAAGTCGTGGGCCACGCCGCCGGTGAGGTGCCCCAGGGACTCCATCTTCTGGGCCTGGAACAGCTC
CTGGCGGGCCCGTTCCAGTTCGCGTTCGGCTTCGATCCGGTGGGTGATGTCACGGGTTACCTTGGCGAAGCC
GATCAGCCGGCCATCGCTGTCGCGGATCGGATCGATCACCACGTTGGCCCAGAAGCGACTGCCGTCCTTGCG
CACCCGCCAGCCTTCCTTCTCGAAACGCCCTTCGCGTTCGGCGGCGGCCAGGCCGCGGGCCGGTTCGCCGGC
CTCGCGGTCTTCGGGGGTGTAGAAGCAGGAGAAGTGCCGGCCGATCACCTCTTCCGGCAGGTAGCCCTTGAT
CCGCTGGGCGCCGAGGTTCCAGTTGGTGATCCGCCCGCGGTGGTCGAGCATGTAGATGGCGTAGTCGGTAAC
GCTCTGCACCAGCAGGCGGAACTGCTCCTGGCTGCGCCGCAGCGCCTCCTTGGCCGCGCGCCCTTCGCTGAG
GTCGTGGATCAGCTGGGCGAAGCCGAGCAACTGGCCCTGGCTGTCGCGGATGGCGTCGATCACCACCTGCGC
CCAGAAGCGCTTGCCGTTGCTGCGCACCCGCCAGCCCTCGGTCTCGAAGCGGCCCTCGGCATCCGCCTGGCG
CAGCGCCTGTTGCGGAACGCCGGCGTCGCGGTCCTTGCGGGTATGAAAGCAGGCGTAGTCGCAGCCGAGGAT
CTCGCTCGCGTCGTGGCCGAACAGGCGCGCCGCGCCGGCGCTCCAGCTGGCGATACGGCCAGCGCTGTCCAG
CGTGTGGATCGCGTAGTCGTCGACCGCTTCGTCGAGCAGGCGGTTGCGCGTGGCCTGGTTCAAGGGGACTTT
CGGTTTTCTTGTGGTTTTCATGGACGTGTTCACTCGTCGGCTGCTCGACCCGGGCTGCAAGGCACACCCAGC
AAGGTAGTACGAAGAACGTCTTCCGGCCGCTCGCTGGCTCGCCCCAGGAACTTGGCCGACCTTTCGGAAGAC
CCCGGCGCGGCCGGCGAATTCCATTCGCCGGAACCTTGTGCGGAGTATGGCTTTCGATATGCAGGTAGGGAC
ATCTCCTTTCCACCGCACCGACCCCGGAGTTCCCATGCGCAATCTGGAAACCGCAACCCTGAAGCTGGGGAT
ATTCCATCCCCACGACAGCCTGAGCCAGGCGCTGATCGCCGCCGCCTTGCAGCGACAGATCGAAGTCAGCGC
CTTGCAAGCCGATCTCAACAGCCTGCAGGCGCGCCCCGGGCTGCGCTGCAAGCCAGCCAGCCTGGCGTCGTC
GATCGAGGTCAGCCAGGCGGCTGCCGGTCTCGACCTGCTGTTCGCGCCGTTGTCCGACTACGCCGCCGAAGC
CTTGCCGCCGATCTGCGCCGCGCTGATCGATGGCGCCCTGCGCGCCGAGGTACCGCGCCTGTTCCTGCTTGG
CCATTGGCAATGGCTGGTGGCGCCGCGCGACGCCGGCGAGGAGCAACTGGGTGCCGGGCTCGAGCGCAGCCT
CACGGTCAGCGGCCTGGACTGGACGCTGGTGGAGGTCCCGAGCCTGCCCGCCGGCCTGCGCATCGACGATTT
CAGCCGCGCCGGCGACGTCGCGGAAGTGGAGGCCGCCAGGGTATTCGCCTGCGCCGAAGCGCTGCTCGACGA
AGTCCGTCTCGGCCTGCACAAGCGCCAGTGCCTGCGCCTGGCGCCCTGAGGAGAACCCGCCATGTCCGGCCC
CGATACCCTCAGCCAGGCCTTCGGCACCTTGCTGCTGGCCCTGGCCTTCAGCGCCTTCATCGTTTTCGTTCG
CGGCTACCGCCCGGGCGGGGTCAGCGGCGCCTGGTACGACCTGGTGCTCGCCTTCGTCGCGGTATGGCTGGC
GTTCTGGCCCGAAGCCGGCGTACTCGCACGCTCGCCGAGCCTGGCCAATGCCCTGGGGTTGGTCTTGCAGGT
CGGCGCTACCCTGCTCGGCTGCCTGCTCGGTTACGGGGTGGCAAGGGGATTGCGGCGGGCGATGCGGGAAAC
CCGGCAAAAAAGATCGGCTTCTTCGCCGGTGAATCGGCGAGGTTCGTAGCGGAGATATCGAGAAAACACATA
TAA

Translation:

MDQQVGHPAQQVGDRAGLRIETLLAGEGKHPLGQVGAALGGLQGVLQEVGGALVAGQAFLQQPEAADDHRQQ
VVEVVGHAAGEVPQGLHLLGLEQLLAGPFQFAFGFDPVGDVTGYLGEADQPAIAVADRIDHHVGPEATAVLA
HPPAFLLETPFAFGGGQAAGRFAGLAVFGGVEAGEVPADHLFRQVALDPLGAEVPVGDPPAVVEHVDGVVGN
ALHQQAELLLAAPQRLLGRAPFAEVVDQLGEAEQLALAVADGVDHHLRPEALAVAAHPPALGLEAALGIRLA
QRLLRNAGVAVLAGMKAGVVAAEDLARVVAEQARRAGAPAGDTASAVQRVDRVVVDRFVEQAVARGLVQGDF
RFSCGFHGRVHSSAARPGLQGTPSKVVRRTSSGRSLARPRNLADLSEDPGAAGEFHSPEPCAEYGFRYAGRD
ISFPPHRPRSSHAQSGNRNPEAGDIPSPRQPEPGADRRRLAATDRSQRLASRSQQPAGAPRAALQASQPGVV
DRGQPGGCRSRPAVRAVVRLRRRSLAADLRRADRWRPARRGTAPVPAWPLAMAGGAARRRRGATGCRARAQP
HGQRPGLDAGGGPEPARRPAHRRFQPRRRRRGSGGRQGIRLRRSAARRSPSRPAQAPVPAPGALRRTRHVRP
RYPQPGLRHLAAGPGLQRLHRFRSRLPPGRGQRRLVRPGARLRRGMAGVLARSRRTRTLAEPGQCPGVGLAG
RRYPARLPARLRGGKGIAAGDAGNPAKKIGFFAGESARFVAEISRKHI*

AnnotationID:5921 GeneID:5920

AnnotatorUID: diggins

Modification Date/Time: 2005-03-03 13:01:31

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11746

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28960