ViewGene

Locus Name:
GeneID:
Location:

GeneID:5917
TrivialName: PA14_36510
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_36510
PAO1 Ortholog Locus:
Sequence Length:1926
Protein Length:641
Start: 3248266
Stop: 3250191
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCACGAGGAACTCGACCAGCGTCCGCCGGCAAGCCTCGATGCCCTCTTCCAGGACGATCTCGAAACCGTG
GGTGTTCTCGGTCGGAATGCCGATGCAGCCGACCTGCGCGGCCTCGCCGTGGCTCAGCAGGGCGCTGGCGTC
CGAGGCGAAGTCCACCAGCAGCGCCGCCTGCGGCTGGTACTGGCAGCGTTCGGCGGCCCGCAACAGGCGGTC
GGTGACATGGCGGCTGTAATAACCCTTGGAGTCGCCGCTGTTGACGATCGGGTCGCGGCACAGCCGGGTGCC
GTATTCGGCTACCGTTGGGCCGACTTCCACCGCGATGCTGATGTCGCCCGGCAGTCGGCGCGCGGCGAACAG
CGCGCCGGCGTTACTCTCCTCCTCCATGGTGGTGAGCACCAGGTAGAGGTCGCCGTGCAACTCGTCGCGGCG
CCGGGCGATCTCGCGAGCCACGCCGAGCACGGCGAGCAGCGGTGCGCGGTCGTCGAGGAAGTGCGCGGCGAC
GCAATCCTGGAAGTACAACGGGCGCCGCCACAGACGGTTGAGCACCACGCGGGTACCCGGTCGCACGTCCAG
GTTCGCCAGTTCCTCGGCGCTGCGCCGGGTGACCACGTGTACGTCGCGCCAGTGCACCGCGCCCGAGAGCAC
GTCGGAGCCCTGCGGCGACTCGCCGGTAGCATGCATGCTGCCGTAGGACAGCACGCCGTCGAGTACCGCCTC
GCCGGCCAGGATCTGTACCGGACAGACGCCGAAGCTCACCGGCTGGGCGCCGCCGAGCGCCACTACGCGCAG
GGTACCGTCGGCCTCGACGCGCTTGACGATCATGGCGATCTCGTCGAGGTGCGCGAGCAGCCGCACCGCGGC
CCGCCGCGCCTGCTCGCGCGGCAGGTGCGGCGGGCTGATGCGCGCGACCAGGTTGCCGGCGGCATCGCTGCC
GACCTCGTCGCAACAGCCCTCGAGTTCCCGCTGGCAGATGGCCCTGACCTCGTCTTCCTGGCCACCGGGGCC
ACGTGCCAGCAGGAGTTCCTCGAGCAAGGCGCGGTCTTCTTCGCGCATGCCTCAGGCCGCCCGTTTTTCCAG
GCGCGCCTTCAGCTCTTTCTTGTGCTGCTGCATGGCCTGGCCGAGTTGCTTGAGGGCGGCGGCGTCGAGCAA
TTGCCGGGCGCGCGGGAACAGCTCGCCCTCCTCCTCCTCGATGTGGTGCTCCAGGAGTTCCTTGAGCACCTT
GACCCGGCCGGCGAACTGCACGGTGTCCGGGCGGGTGCGCTTGAGGTCGGGAAGGACCAGGGAGTCCACCGT
GCGGTGTTCCTCCTTGGCCTCGTAGTACATCTTCAGCTCTTCCTTGCCGCCGCTGTCCCTGATCGCCGGATA
GAGGATGTCTTCCTCGATGGCGGTGTGCAGCACCAGTTCCAGCTCCAGCCTGCCCAGCAGCTCGCTGCGCTT
CTTCAGCGCCCGTTCGGTGGTCTCGCTGAGTTCGTTGAGCAGTTTCTTCACGGTCTCGTGGTCATGGACCAG
CAATTCGATGGCGTTCATGGTCGCTCCTCATCGGTTTGTTATCCGAGTGCTCCGGCACTCTCTCTGGCTGAG
CGCGCGCTCCTCCGCCGAGTTCAGTCACGAGGACGGGCGGTCGCCTCGATCAGCGGAAACGCGGAGATCCGC
AATGAGCGCGGTTCCTGGCCGTCGCGCAGCAAGGCCCGGGACCGCCTCATGGCATTCCCCTCGCGGCACCGG
GCCTCAGGCGCGGGCGTCGCGCAGGGCGCGGACCCGGTCGTGGTGACGGAGCACGCCCTGGTACTGGCGCTC
GATCACCTGGTGGATCTCCGCCGGCAGCGGTTTTTCCAGCGCCGCCTGGTAACGCTGCTTGGCGACATCCTC
GCCGCGCTCGCATTCGTTGAGCACCGCCTCTTCGTCCTTGCCGGTGACCAGTGA
Translation:
MHEELDQRPPASLDALFQDDLETVGVLGRNADAADLRGLAVAQQGAGVRGEVHQQRRLRLVLAAFGGPQQAV
GDMAAVITLGVAAVDDRVAAQPGAVFGYRWADFHRDADVARQSARGEQRAGVTLLLHGGEHQVEVAVQLVAA
PGDLASHAEHGEQRCAVVEEVRGDAILEVQRAPPQTVEHHAGTRSHVQVRQFLGAAPGDHVYVAPVHRAREH
VGALRRLAGSMHAAVGQHAVEYRLAGQDLYRTDAEAHRLGAAERHYAQGTVGLDALDDHGDLVEVREQPHRG
PPRLLARQVRRADARDQVAGGIAADLVATALEFPLADGPDLVFLATGATCQQEFLEQGAVFFAHASGRPFFQ
ARLQLFLVLLHGLAELLEGGGVEQLPGAREQLALLLLDVVLQEFLEHLDPAGELHGVRAGALEVGKDQGVHR
AVFLLGLVVHLQLFLAAAVPDRRIEDVFLDGGVQHQFQLQPAQQLAALLQRPFGGLAEFVEQFLHGLVVMDQ
QFDGVHGRSSSVCYPSAPALSLAERALLRRVQSRGRAVASISGNAEIRNERGSWPSRSKARDRLMAFPSRHR
ASGAGVAQGADPVVVTEHALVLALDHLVDLRRQRFFQRRLVTLLGDILAALAFVEHRLFVLAGDQ*
AnnotationID:5918GeneID:5917
AnnotatorUID: diggins
Modification Date/Time: 2005-03-03 12:12:30
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15772
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28954
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48919How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1705649Stop: 1703724
Length: 1926
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCACGAGGAACTCGACCAGCGTCCGCCGGCAAGCCTCGATGCCCTCTTCCAGGACGATCTCGAAACCGTG
GGTGTTCTCGGTCGGAATGCCGATGCAGCCGACCTGCGCGGCCTCGCCGTGGCTCAGCAGGGCGCTGGCGTC
CGAGGCGAAGTCCACCAGCAGCGCCGCCTGCGGCTGGTACTGGCAGCGTTCGGCGGCCCGCAACAGGCGGTC
GGTGACATGGCGGCTGTAATAACCCTTGGAGTCGCCGCTGTTGACGATCGGGTCGCGGCACAGCCGGGTGCC
GTATTCGGCTACCGTTGGGCCGACTTCCACCGCGATGCTGATGTCGCCCGGCAGTCGGCGCGCGGCGAACAG
CGCGCCGGCGTTACTCTCCTCCTCCATGGTGGTGAGCACCAGGTAGAGGTCGCCGTGCAACTCGTCGCGGCG
CCGGGCGATCTCGCGAGCCACGCCGAGCACGGCGAGCAGCGGTGCGCGGTCGTCGAGGAAGTGCGCGGCGAC
GCAATCCTGGAAGTACAACGGGCGCCGCCACAGACGGTTGAGCACCACGCGGGTACCCGGTCGCACGTCCAG
GTTCGCCAGTTCCTCGGCGCTGCGCCGGGTGACCACGTGTACGTCGCGCCAGTGCACCGCGCCCGAGAGCAC
GTCGGAGCCCTGCGGCGACTCGCCGGTAGCATGCATGCTGCCGTAGGACAGCACGCCGTCGAGTACCGCCTC
GCCGGCCAGGATCTGTACCGGACAGACGCCGAAGCTCACCGGCTGGGCGCCGCCGAGCGCCACTACGCGCAG
GGTACCGTCGGCCTCGACGCGCTTGACGATCATGGCGATCTCGTCGAGGTGCGCGAGCAGCCGCACCGCGGC
CCGCCGCGCCTGCTCGCGCGGCAGGTGCGGCGGGCTGATGCGCGCGACCAGGTTGCCGGCGGCATCGCTGCC
GACCTCGTCGCAACAGCCCTCGAGTTCCCGCTGGCAGATGGCCCTGACCTCGTCTTCCTGGCCACCGGGGCC
ACGTGCCAGCAGGAGTTCCTCGAGCAAGGCGCGGTCTTCTTCGCGCATGCCTCAGGCCGCCCGTTTTTCCAG
GCGCGCCTTCAGCTCTTTCTTGTGCTGCTGCATGGCCTGGCCGAGTTGCTTGAGGGCGGCGGCGTCGAGCAA
TTGCCGGGCGCGCGGGAACAGCTCGCCCTCCTCCTCCTCGATGTGGTGCTCCAGGAGTTCCTTGAGCACCTT
GACCCGGCCGGCGAACTGCACGGTGTCCGGGCGGGTGCGCTTGAGGTCGGGAAGGACCAGGGAGTCCACCGT
GCGGTGTTCCTCCTTGGCCTCGTAGTACATCTTCAGCTCTTCCTTGCCGCCGCTGTCCCTGATCGCCGGATA
GAGGATGTCTTCCTCGATGGCGGTGTGCAGCACCAGTTCCAGCTCCAGCCTGCCCAGCAGCTCGCTGCGCTT
CTTCAGCGCCCGTTCGGTGGTCTCGCTGAGTTCGTTGAGCAGTTTCTTCACGGTCTCGTGGTCATGGACCAG
CAATTCGATGGCGTTCATGGTCGCTCCTCATCGGTTTGTTATCCGAGTGCTCCGGCACTCTCTCTGGCTGAG
CGCGCGCTCCTCCGCCGAGTTCAGTCACGAGGACGGGCGGTCGCCTCGATCAGCGGAAACGCGGAGATCCGC
AATGAGCGCGGTTCCTGGCCGTCGCGCAGCAAGGCCCGGGACCGCCTCATGGCATTCCCCTCGCGGCACCGG
GCCTCAGGCGCGGGCGTCGCGCAGGGCGCGGACCCGGTCGTGGTGACGGAGCACGCCCTGGTACTGGCGCTC
GATCACCTGGTGGATCTCCGCCGGCAGCGGTTTTTCCAGCGCCGCCTGGTAACGCTGCTTGGCGACATCCTC
GCCGCGCTCGCATTCGTTGAGCACCGCCTCTTCGTCCTTGCCGGTGACCAGTGA