ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5906

TrivialName: PA14_37020

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_37020

PAO1 Ortholog Locus:

Sequence Length: 2724

Protein Length: 907

Start: 3296843

Stop: 3299566

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAM38389.1| (AE012003) outer membrane protein [Xanthomonas axonopodis pv. citri str. 306] Identities = 171/780 (21%), Positives = 256/780 (32%), Gaps = 131/780 (16%)

Sequence:

TTGCCTGGGCGCTGGCGGGAAACCCCAGCGACACGCCGAGGGCCAGCGCGGACGACAGGAGAATCATGTGGT
TCATCTGGCGGTCTCCGGGTTGGAATCGATGGCGGCTGCCCGGCAGGTGCCGCGCAGGCGGATCAGCACCTG
GTCGCGGGGCGCGCCGGCCAGGTCGTAGGGCAGCTCGCAACGCTCCTGCCGTGCCGTTCCCCATTGCACCAG
CAACCTGCCCCGCTGGTTTTCCGCGCGCGCATAGACCTGGCCGCCCTGCCCGACCATGCCGATGGCCGCCCC
GCCGTCGTCGACCACCACGGCGCCGAGCGGCAGCACACTGCCGTCCTCGCGCCGCGCCTGGATCAGCAGCGG
ATGGCCGGTCAGCGTCCTGAACGTCACGCGCACGCTGGCACCGGCGTAGGGCGCGACCTTGCGCTCGGTTTC
CAGCAGTTCGGCGTCGGGATCGATGCCAACGGGATCGAGGGAGATCGGGTTGTAGCGATAGGGCGACAGCGA
GGGAGCCAGCGCATAGCCGTTGCCGTCGATGCGCGCGCCCTGCCCGCCGCGTATCGCGGCACCGCTGGCGCC
CTTGGCCTCGACCAGGGCGAAGGTATCGCCGACGCTGGGGCCCAGGGTCAGCCCGTCGCGGTGGGCGACCAG
CGCGCCACGGATGCCGCCGCTGTATTGCCGGTAGCGATCGCCCTGGGCATAGCCGGCATTCACGGTGGCCAG
CGCCGCCTGCTTCTGCAACGTGCCGTTCCAGGTGGTGTCGGCGACCTCGCTGTCGCGGTTGGCGGACAGCGC
GTAGCTCCAGGTACGCTCGTCGCCCAGCGTACCGTTCAGCCCGGTTTGCAGGCTGCCGCCACGGCTGTCGCC
GGAGCGCCGGGTAGCCATGGCGCTGAGCGTCGGCGCCCGACTGGAAGAACCCAGCGGCATGGAGACGCTGAG
GGTCAGGGTGTCGTTGCGCTGGCCGCTGCGCCGGTCGCGCCGGAGCAGCTCGACGCCAGGGTCCTGGTCGCC
CTGCTCCTGGTAGTAGGTGGTGGTCTGCCGCGACCAGGCGAGGTTGTAGCTCAACTGCCCCCAGGTGTTGGA
GTAGCCGAACTGCAATTGGGTGTCGCGGCTCTTGCCGTCGTAGAAATCGCTGGAGGAGCCGGAAAGATAGAG
GTTGCCGTAACCGCCGAGGGCCTGGCTCACCAGCAGGTTGAACTGGTTGCGCTGCTTGTAGCTGCCGGAATC
CCAGGTGTCCCCGTGGCGCAGTGCGTCGCGCGAGCCGAGCACGTCGCCGAGTTCGCGGTAGCCTTCGGTGGA
ATAGCGGTAGCCGGCCAGGGTCAGGGTAGTGCCGGTGGGCTGGAAGGTCCGGCTGTAGTCGAGCCCGATGCG
CCAGCCCTGCTTGCGCGCGCCATCCTCGACGCGTGCGCTGGAATAGGTGCTGTTCAGGCCGAAGGCGCCGAA
GCGGGTGGCGAGGACGCCGCCGCCCAGCATGGCCAGGTAGTCGTCGGCGACACGCAGTCCCAGGTTGGCGGT
CAGGGCGTTGCTCATGCCGCGCTGGTAGGTGAAGTCGGCGAACAGGTCGTCGCCGTCGCCGTACTGGCGCGC
CTGGCCCAGGGTGAAGCTGTAGCGCGACAGGCCGGGACGCATGGACTCCGGGACCGAGGCGAACGGCACGCT
GAAGCTCGATACGCTGCCATCGGCTTCGAACACCTGGACATCCAGATCGCCGGCATAGGCGCTGTCGTAGAG
ATCGTCGATGACGAACGGACCGGGGGCGACATTCACCTCGCGGATCTTCCTGCCGTTCTGGCTGATCACCAC
CCGCGCCGCGGTGGCCGCTGTGCCGCGCACCTGCGGCGCATAGCGGCGCAGGGACTCGGGCAGCATGCGGTC
GTCGGTGGCCAGGCTCAGGCCGCGGTAGCCGATGCTGCCGAGCAGGTTGCCGGCGGTGTAGCTCTCCCCCGC
CGTCAGTTCGCTGCGCCAGGCCGGCAAGGCGCGCTGGGCATAGGTGCGGATGCCGTTCCACTTGCGCCTGGC
CTGCCCGTTGTAGCGGGAATAGGTGTAGTTGGACTGGTGGCGCAAACGCCACAGGCCGAGGTTGATGCCGCT
GTTCAGGCCGACATAGGCGTAGTCCGATCGTCCCGATTCGCCGCCGCGGTATTCGGAGCGATAGAGGTTGGT
GTCGTAGTTGACGAAGCCCATGCTGTCGCCGGCGTCCCACTCCTCGGGGCTGACGTAGCCGCGCGGCTTGAG
GTCGAGCAAGGCTTGCGGCACCGAGAGATCCAGGCGCAGGCGGGCGACGTCCAGGCTGAACCGCGAGCCGGG
CAGGCGTGCACCGAGAAAGGCGCAGTGGCGCCCGTCGCCGCTCTTGCGCGGATCGTCACCAGGCTTGGCGCC
GAGGCGCTGGCGCAGGAAGTCTTCGTCGAGGCAGGGCTCCACCGCGCCGCTGGCGGGGTTGGCGCGGAAACT
CACTTCGCTGCGGCTGGCGAAGCGCTCGTTGAGGTAGACATCCACGTGATAGCGACCCGGATCGATCCGACC
GTCCTGGTTGAAGCGCGACAGGTCGCCGCCGCCCAGGGAAGAGCCGAGCAACAGGCGATCATCGAATTCGTA
GCCGGGCTGGGCATGACCGAAGGCGCTCGCCGCCAGCGCCATGCCGCCCGCCATCAGGGCCGTGCCGGTGCG
GCAGCGGCGTTCATGGCGATAGGTCATGACGGATATCCATATGGGCGCCGTAGTCGTTGA

Translation:

MPGRWRETPATRRGPARTTGESCGSSGGLRVGIDGGCPAGAAQADQHLVAGRAGQVVGQLATLLPCRSPLHQ
QPAPLVFRARIDLAALPDHADGRPAVVDHHGAERQHTAVLAPRLDQQRMAGQRPERHAHAGTGVGRDLALGF
QQFGVGIDANGIEGDRVVAIGRQRGSQRIAVAVDARALPAAYRGTAGALGLDQGEGIADAGAQGQPVAVGDQ
RATDAAAVLPVAIALGIAGIHGGQRRLLLQRAVPGGVGDLAVAVGGQRVAPGTLVAQRTVQPGLQAAATAVA
GAPGSHGAERRRPTGRTQRHGDAEGQGVVALAAAPVAPEQLDARVLVALLLVVGGGLPRPGEVVAQLPPGVG
VAELQLGVAALAVVEIAGGAGKIEVAVTAEGLAHQQVELVALLVAAGIPGVPVAQCVARAEHVAEFAVAFGG
IAVAGQGQGSAGGLEGPAVVEPDAPALLARAILDACAGIGAVQAEGAEAGGEDAAAQHGQVVVGDTQSQVGG
QGVAHAALVGEVGEQVVAVAVLARLAQGEAVARQAGTHGLRDRGERHAEARYAAIGFEHLDIQIAGIGAVVE
IVDDERTGGDIHLADLPAVLADHHPRRGGRCAAHLRRIAAQGLGQHAVVGGQAQAAVADAAEQVAGGVALPR
RQFAAPGRQGALGIGADAVPLAPGLPVVAGIGVVGLVAQTPQAEVDAAVQADIGVVRSSRFAAAVFGAIEVG
VVVDEAHAVAGVPLLGADVAARLEVEQGLRHREIQAQAGDVQAEPRAGQACTEKGAVAPVAALARIVTRLGA
EALAQEVFVEAGLHRAAGGVGAETHFAAAGEALVEVDIHVIATRIDPTVLVEARQVAAAQGRAEQQAIIEFV
AGLGMTEGARRQRHAARHQGRAGAAAAFMAIGHDGYPYGRRSR*

AnnotationID:5907 GeneID:5906

AnnotatorUID: diggins

Modification Date/Time: 2005-03-03 10:10:00

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15767

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28932