ViewGene

Locus Name:
GeneID:
Location:

GeneID:5903
TrivialName: PA14_37110
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_37110
PAO1 Ortholog Locus:
Sequence Length:1848
Protein Length:615
Start: 3305571
Stop: 3307418
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 139/503 (27%), Positives = 185/503 (36%), Gaps = 57/503 (11%)
Sequence:
GTGCTCGGCAACGGCGATGGTGGTGATGTTGGTGGCCACCGAAATGGCATCGGGGAAGATCGAGGCGTCGAT
CACCCGCAATCCTTGCAGGCCATGCACCCTGCCCTCCAGGTCGACCACCGCCCAGCGCTCGCCGGCGCGGCC
CATCGGCGCGCTGGAGGTCGGGTGGTGGTAGGTATCGAGGGTGGCGCGGATCGCCGCTTCGATCTGCGCATC
GCTGCGTGCCTCGGGCCCTGGTCCGAGTTCGGCGTGGATCAGCCCGGCGAGCGGTTCGCTGCGGCCGATCCG
GCGCGCCAGCTTGACCCCTTCCAGCAACCGCGCGCGGTCTTCGGCCTCGGCGAGGAAGTTCAGGTCGATCAG
CGGCGCGACGGCCGGGTCGCGGCTGGCCAGGCGCACACTGCCCAGCGATTGCGGCCGGGTCAGGGCCACGGC
GAGGACGAAGCCGACCCCGGTCGGGCTCATCTCGGCGGGGAACAGGTGGGTGGCGGTGATGTGCAGGTCCAG
CTCGCCGTTCTGCGCCCGCGAGCTATGGGTCCAGAGCTTGGCGCCGATCACCGGCGACTGCGCGCCGATGCG
CTCCGGCCGGGCGGCATAGGCGTTGTAGTAGAACGGATGGTCCTTGAGCCGGCGGCCCACCGGCAAGTCGGC
AAGCAACGGGATCGACAGCGCCTTCAGCTCGTCGGCCGGGCCGACACCGGAGCGCAGCAGGATCGCCGGGCT
GCCGTAGGCGCCGGCGCTGAGGATCACTTCGCCGGCGTGGATTTCCTCGCCGGAGGCCAGGCGCACGCCCAC
CGCGCGCTTACCTTCGAAGAGCACCCGGTCGACCAGCGCGTCGCCGCGGATCGACAGGTTGGCGCGGCCGCG
CACGGCGTTGTCGAGATAGGCCATGCCGGTGTTGACGCGCACACCGTTGACGACATTCATCGGGTACGGCCC
GACGCCGTTGGCGTCGGCGCCGTCGAAATCGACGATGGCCTTGAAACCGTTGGCCAGGGTGGCGTCGACGAA
GGCCCTCTGCATCGGCGAGAGATCGGCGCGGCTCAGTTGCCGCACCGGCAGCGGTCCGTCCCCGCCGTGCAG
GGCCGGGTCGCCGCCCTGGCGGGTCTCCAGGCGGCGGAACGCCGGCAGCAGGTCGTCGTAGGACCAGCCCGG
CAGGTTCCAGCGGGCGAAGTCTTCGCGCCGCGCGCGGATCGCCACCGCGCCGTTGATCGCCGAGCTGCCGCC
GAGGACCTTGCCGCGGATCGCATGGATCGGATGCCCGATCGCCCCCGGTTGGGACTGGTAGCCCCAGTCGCT
GGCGGGGTCGCCGCCGACGCTGTCGCTGCTGGCGATGATCCTGGGGTAGTCCCAGGCCGGATAGGCCTGGCC
GGCTTCCAGCAACAGTACCCGGCGGTCGCCGCGCTCGCTCAGGCGCCGGGCGAGGACCGCGCCGGCGGAGCC
GCCGCCGACGATCAGCACATCGATCCTGCCGCCATCGAAGGCCTTGCGGGGCGTTTCCGCCGTGGCGCTGGC
CACGCCGGGCGCGCCGCCGAGCAGCGAGCCCAGGGCGAGCGCGGCGGAGCCGGCGACGGTCTGCGCCAGCAA
GGTGCGGCGCGCCGGGTTTTCGGGTTGGTGCATGGGGTTCTCCCGTATCCAGATCGATTGACGGGAGCAACG
CTATGCCCGGCGCGCCCTCGGCGACAGACAGCGGAAGGCGAACCGCTGGTTCGGTTTTTCCGAACTCAGCCC
GGCGGCAACAGGCCACGCTCGATGAGCGCGCGGTCCCAGGGCGCCGGATCGCCGATTTCCTCTTCGAGGAAC
TGGCCGAGGACGAGGATCTTCCGGGGCGTCCGTTGGGTCTTGCGGTAG
Translation:
MLGNGDGGDVGGHRNGIGEDRGVDHPQSLQAMHPALQVDHRPALAGAAHRRAGGRVVVGIEGGADRRFDLRI
AACLGPWSEFGVDQPGERFAAADPARQLDPFQQPRAVFGLGEEVQVDQRRDGRVAAGQAHTAQRLRPGQGHG
EDEADPGRAHLGGEQVGGGDVQVQLAVLRPRAMGPELGADHRRLRADALRPGGIGVVVERMVLEPAAHRQVG
KQRDRQRLQLVGRADTGAQQDRRAAVGAGAEDHFAGVDFLAGGQAHAHRALTFEEHPVDQRVAADRQVGAAA
HGVVEIGHAGVDAHTVDDIHRVRPDAVGVGAVEIDDGLETVGQGGVDEGPLHRREIGAAQLPHRQRSVPAVQ
GRVAALAGLQAAERRQQVVVGPARQVPAGEVFAPRADRHRAVDRRAAAEDLAADRMDRMPDRPRLGLVAPVA
GGVAADAVAAGDDPGVVPGRIGLAGFQQQYPAVAALAQAPGEDRAGGAAADDQHIDPAAIEGLAGRFRRGAG
HAGRAAEQRAQGERGGAGDGLRQQGAARRVFGLVHGVLPYPDRLTGATLCPARPRRQTAEGEPLVRFFRTQP
GGNRPRSMSARSQGAGSPISSSRNWPRTRIFRGVRWVLR*
AnnotationID:5904GeneID:5903
AnnotatorUID: diggins
Modification Date/Time: 2005-03-03 09:09:32
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15765
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28926
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48905How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1648343Stop: 1646496
Length: 1848
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCTCGGCAACGGCGATGGTGGTGATGTTGGTGGCCACCGAAATGGCATCGGGGAAGATCGAGGCGTCGAT
CACCCGCAATCCTTGCAGGCCATGCACCCTGCCCTCCAGGTCGACCACCGCCCAGCGCTCGCCGGCGCGGCC
CATCGGCGCGCTGGAGGTCGGGTGGTGGTAGGTATCGAGGGTGGCGCGGATCGCCGCTTCGATCTGCGCATC
GCTGCGTGCCTCGGGCCCTGGTCCGAGTTCGGCGTGGATCAGCCCGGCGAGCGGTTCGCTGCGGCCGATCCG
GCGCGCCAGCTTGACCCCTTCCAGCAACCGCGCGCGGTCTTCGGCCTCGGCGAGGAAGTTCAGGTCGATCAG
CGGCGCGACGGCCGGGTCGCGGCTGGCCAGGCGCACACTGCCCAGCGATTGCGGCCGGGTCAGGGCCACGGC
GAGGACGAAGCCGACCCCGGTCGGGCTCATCTCGGCGGGGAACAGGTGGGTGGCGGTGATGTGCAGGTCCAG
CTCGCCGTTCTGCGCCCGCGAGCTATGGGTCCAGAGCTTGGCGCCGATCACCGGCGACTGCGCGCCGATGCG
CTCCGGCCGGGCGGCATAGGCGTTGTAGTAGAACGGATGGTCCTTGAGCCGGCGGCCCACCGGCAAGTCGGC
AAGCAACGGGATCGACAGCGCCTTCAGCTCGTCGGCCGGGCCGACACCGGAGCGCAGCAGGATCGCCGGGCT
GCCGTAGGCGCCGGCGCTGAGGATCACTTCGCCGGCGTGGATTTCCTCGCCGGAGGCCAGGCGCACGCCCAC
CGCGCGCTTACCTTCGAAGAGCACCCGGTCGACCAGCGCGTCGCCGCGGATCGACAGGTTGGCGCGGCCGCG
CACGGCGTTGTCGAGATAGGCCATGCCGGTGTTGACGCGCACACCGTTGACGACATTCATCGGGTACGGCCC
GACGCCGTTGGCGTCGGCGCCGTCGAAATCGACGATGGCCTTGAAACCGTTGGCCAGGGTGGCGTCGACGAA
GGCCCTCTGCATCGGCGAGAGATCGGCGCGGCTCAGTTGCCGCACCGGCAGCGGTCCGTCCCCGCCGTGCAG
GGCCGGGTCGCCGCCCTGGCGGGTCTCCAGGCGGCGGAACGCCGGCAGCAGGTCGTCGTAGGACCAGCCCGG
CAGGTTCCAGCGGGCGAAGTCTTCGCGCCGCGCGCGGATCGCCACCGCGCCGTTGATCGCCGAGCTGCCGCC
GAGGACCTTGCCGCGGATCGCATGGATCGGATGCCCGATCGCCCCCGGTTGGGACTGGTAGCCCCAGTCGCT
GGCGGGGTCGCCGCCGACGCTGTCGCTGCTGGCGATGATCCTGGGGTAGTCCCAGGCCGGATAGGCCTGGCC
GGCTTCCAGCAACAGTACCCGGCGGTCGCCGCGCTCGCTCAGGCGCCGGGCGAGGACCGCGCCGGCGGAGCC
GCCGCCGACGATCAGCACATCGATCCTGCCGCCATCGAAGGCCTTGCGGGGCGTTTCCGCCGTGGCGCTGGC
CACGCCGGGCGCGCCGCCGAGCAGCGAGCCCAGGGCGAGCGCGGCGGAGCCGGCGACGGTCTGCGCCAGCAA
GGTGCGGCGCGCCGGGTTTTCGGGTTGGTGCATGGGGTTCTCCCGTATCCAGATCGATTGACGGGAGCAACG
CTATGCCCGGCGCGCCCTCGGCGACAGACAGCGGAAGGCGAACCGCTGGTTCGGTTTTTCCGAACTCAGCCC
GGCGGCAACAGGCCACGCTCGATGAGCGCGCGGTCCCAGGGCGCCGGATCGCCGATTTCCTCTTCGAGGAAC
TGGCCGAGGACGAGGATCTTCCGGGGCGTCCGTTGGGTCTTGCGGTAG