ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5902

TrivialName: PA14_37160

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_37160

PAO1 Ortholog Locus:

Sequence Length: 1371

Protein Length: 456

Start: 3312202

Stop: 3310832

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA64719.1| (X95444) Rho [Streptomyces lividans] Identities = 75/278 (26%), Positives = 108/278 (38%), Gaps = 50/278 (17%)

Sequence:

ATGGGTGGAACCCGCTTCGTCGTTCGCGACGGGTTCGCCACCTCCGTCCAGCAGTATAGAACGGCGGCCTCA
GCCGCCGTCGAGGGAAAGGATGTAGCCCAGTTGCGGTGCCGAGCGCCCGGCCAGCAGGTCCTGGTAGACCTC
CAGCACCTCGCTGCCGCCGACACCGTGGCGGACCTGGATCCAGCCGCCGACGAAGGCCGAGAACTCGCCCCA
GACTTCCGCCAGGCGCGCCTGGAACGCCGCGCCGCCCCAGTCCTTGAGGCGTTTTTCCGCCTGCGCCGGGGC
GAAGAACAGCTTCGGCGTCGGACCCGGCAGCGCCTTCGGCAGGCCACCGCGCTGGTCCCAGTGGGCGGCGCC
GACCAGGCAACTGTAGCGCAGGCGGTCGCCCAGGCGCTGGTGCAACTGGCCGAGCAGGGCGCCGTTGCCGGC
GAAATCCACGCTCAGCGCGTCTCCGCTGGCGTCCAGTGCGTCCAGGCGGTCGTAGGCCAGGACCTCGTCATA
GCAGCCCAGGCCTTCGACGAAGGCGCGGTTGCCCGCGGAGGTCAGGCCGACGATGCGGTAGTCCTGGCCGCG
TTGCGCACGATTGCGCTGGAGGAGGAAGGCCAGGCCGATGGCGGTCTTGCTCGAGGCACTGCTCAGCAGCAG
GTCGGTGGCGCCGAAGAAGGCATGCTCGGCGAGGAAGTCGTCGAGCAGGAACGAGGTGGTGAACAGCGGCCG
CAGGAGCATCTGCAGGGCCTCGTCGGAGGCCCGGTAGAGCGGGTCGCTGCTGCAGCGCAGGTACTGGTTGTA
GACCGACGGGAGGTTCCGGCGGTGCTCGCTGGCGTCGACGAAGCCGCTGCCGCGGACCTGCGCCGGCGCGAC
CAGCAGGTGGCTGGCCATCGGATAGTAGCCATAGAAGCGCTCGCCCGGTTCGACCCCCGGGCAGCGCGAGGC
AAGCACCTCGGCGAAGCCCCAGACCGGGACGATGCCCAGCCCCTCGCCGGCCGGGAAGAACTCCCAGTAGCG
CAGGGCATCGCCGAGGGCGGCATAGGTGACGTTGTTGGCGGTCAGGGCGAACTCGCCGACCGCCAGCAGCGC
CTGGCCTTCCGCCAGCGCCTCCGGGGCGGGCAGGTTGCGCGTACGCAAGGCGGCGGTGGCGAGCTGGCGACG
CTCGACCACGACTTCGGTGATGCGGGTCATGGCAGGTTCCTCCGCCTCAGGCCTTGCTCGCGGCCAGATAGG
GCGCCAGGCGCCGGCCCATTTCCTCGCCGAGGGCCTGGAGGCCGCTCATGGGGCGGACCATCACTTCGAAGT
CGACGATCCGGCCGTCGTCGTCGAAGCGGATCATGTCGATGCCTTTCAGTTCGCGTTCGCCGACCCGCGCGC
TGA

Translation:

MGGTRFVVRDGFATSVQQYRTAASAAVEGKDVAQLRCRAPGQQVLVDLQHLAAADTVADLDPAADEGRELAP
DFRQARLERRAAPVLEAFFRLRRGEEQLRRRTRQRLRQATALVPVGGADQATVAQAVAQALVQLAEQGAVAG
EIHAQRVSAGVQCVQAVVGQDLVIAAQAFDEGAVARGGQADDAVVLAALRTIALEEEGQADGGLARGTAQQQ
VGGAEEGMLGEEVVEQERGGEQRPQEHLQGLVGGPVERVAAAAQVLVVDRREVPAVLAGVDEAAAADLRRRD
QQVAGHRIVAIEALARFDPRAARGKHLGEAPDRDDAQPLAGREELPVAQGIAEGGIGDVVGGQGELADRQQR
LAFRQRLRGGQVARTQGGGGELATLDHDFGDAGHGRFLRLRPCSRPDRAPGAGPFPRRGPGGRSWGGPSLRS
RRSGRRRRSGSCRCLSVRVRRPAR*

AnnotationID:5903 GeneID:5902

AnnotatorUID: diggins

Modification Date/Time: 2005-03-03 09:09:09

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11714

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28924