ViewGene
Locus Name:
GeneID:
Location:

GeneID:5897
TrivialName: PA14_37280
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_37280
PAO1 Ortholog Locus:
Sequence Length:867
Protein Length:288
Start: 3320973
Stop: 3320107
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGTCCGATGGGTTCGAAGCGCACCCGGTCGCCGGCGCGCAGCAGGCTGTAGCCGTCCAGGGCGAGGTCGAA
CAGGCGCACCGGGCAGCGCCCGAGCAGGTTCCAGCCGCCTGGCGAGGCCTGCGGATAGACCGCCGTCTGGCG
CTCGGCGATGCCGACGCTGCCGGCGGCGATGCGTTGCCGGGGAGTCGCCAGGCGGGGTGCCGCCAGGGCTTC
CTCGACCAGCCCCATGAAGGCGAAGCCGGGGCTGAAACCGAGGGCGAAGACCCGGTACTCGCGCTGGCTGTG
GCGGCGGATCAGTTCGGCGACGCCGAGCTGCTTGCGCCGCGCCAGGGGTTCCAGGTCGGGGCCGACCCGCGG
GTCGTACCAGGTCGGCAGGACGTGCAGGCGGCCGCCGTCCTGGCGTTTCGGGCGCAAGTCGGACAGCGCCGC
GGCGATCCGCGCGCGGGCCTCGCCGGGGTCGAGCTGGAGCAGGTCGTATTGCAGGAGCAGGGTGGTGTAGGA
CGGCACCAGGTCGAGCAGGGCGGCGCCGAACGCCGCCCGCAGGTTTTCCTCCGCCGCCAGCAGCCAGGGCAT
GTTGGCTTCGTCGATGCGCTCGAACAGGCGCAGGACGAAGCTGTCGATGGCGGCCACCTCGATGCGCGGTTG
CGGTTGGCTCATGCCGCCTCCAGGGCGTCGCGGATGCGCCGCACCGCGGCCAGCGAGGCGGGGTTGTCACCG
TGTACGCAGAGGGTCTGCGCCTCCAGCGCCAGGGCGCTGCCGTCGCTGGCTCGCAGCGGCGCGCCACGGGCC
AGCAGGAGGGCCTGGGCGAGCACCGTCTCGGCGTCGTGGTGTACCGCGCCGGGCTGGCTGCGCGAGACCAGG
TAG
Translation:
MSDGFEAHPVAGAQQAVAVQGEVEQAHRAAPEQVPAAWRGLRIDRRLALGDADAAGGDALPGSRQAGCRQGF
LDQPHEGEAGAETEGEDPVLALAVAADQFGDAELLAPRQGFQVGADPRVVPGRQDVQAAAVLAFRAQVGQRR
GDPRAGLAGVELEQVVLQEQGGVGRHQVEQGGAERRPQVFLRRQQPGHVGFVDALEQAQDEAVDGGHLDARL
RLAHAASRASRMRRTAASEAGLSPCTQRVCASSARALPSLARSGAPRASRRAWASTVSASWCTAPGWLRETR
*
AnnotationID:5898GeneID:5897
AnnotatorUID: diggins
Modification Date/Time: 2005-03-03 08:08:02
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:15759




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28914




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48899How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 1632941Stop: 1633807

          
Length: 867


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGTCCGATGGGTTCGAAGCGCACCCGGTCGCCGGCGCGCAGCAGGCTGTAGCCGTCCAGGGCGAGGTCGAA 
CAGGCGCACCGGGCAGCGCCCGAGCAGGTTCCAGCCGCCTGGCGAGGCCTGCGGATAGACCGCCGTCTGGCG 
CTCGGCGATGCCGACGCTGCCGGCGGCGATGCGTTGCCGGGGAGTCGCCAGGCGGGGTGCCGCCAGGGCTTC 
CTCGACCAGCCCCATGAAGGCGAAGCCGGGGCTGAAACCGAGGGCGAAGACCCGGTACTCGCGCTGGCTGTG 
GCGGCGGATCAGTTCGGCGACGCCGAGCTGCTTGCGCCGCGCCAGGGGTTCCAGGTCGGGGCCGACCCGCGG 
GTCGTACCAGGTCGGCAGGACGTGCAGGCGGCCGCCGTCCTGGCGTTTCGGGCGCAAGTCGGACAGCGCCGC 
GGCGATCCGCGCGCGGGCCTCGCCGGGGTCGAGCTGGAGCAGGTCGTATTGCAGGAGCAGGGTGGTGTAGGA 
CGGCACCAGGTCGAGCAGGGCGGCGCCGAACGCCGCCCGCAGGTTTTCCTCCGCCGCCAGCAGCCAGGGCAT 
GTTGGCTTCGTCGATGCGCTCGAACAGGCGCAGGACGAAGCTGTCGATGGCGGCCACCTCGATGCGCGGTTG 
CGGTTGGCTCATGCCGCCTCCAGGGCGTCGCGGATGCGCCGCACCGCGGCCAGCGAGGCGGGGTTGTCACCG 
TGTACGCAGAGGGTCTGCGCCTCCAGCGCCAGGGCGCTGCCGTCGCTGGCTCGCAGCGGCGCGCCACGGGCC 
AGCAGGAGGGCCTGGGCGAGCACCGTCTCGGCGTCGTGGTGTACCGCGCCGGGCTGGCTGCGCGAGACCAGG 
TAG