ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5890

TrivialName: PA14_37540

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_37540

PAO1 Ortholog Locus:

Sequence Length: 2388

Protein Length: 795

Start: 3340852

Stop: 3343239

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAL59408.1| (AY028431) unknown [Burkholderia cepacia genomovar III] [Burkholderia cenocepacia] Identities = 171/630 (27%), Positives = 241/630 (38%), Gaps = 94/630 (14%)

Sequence:

ATGGGCGGCGCCTCACAGGATGATGCTGATGCGCCGCTGGGCGCTGATGGTCTCGTGGTCCAGGCGGATCTC
CCGCGAGACGATGCGCAAGCCCTCGGGACCGTCGCGCAGGACATGGCTGGCTTCGCCGACGAAGTTCCAGGC
CTCGCGGTTGCGGAACTGATGGACGACGAAGTTGCTGCGGCTGCTGACCAGTTCGCCCTCGACCCGCTTCAG
CCGCACGTTGCCCACCAGGCGGCGGGTGCGCGAGCGCGGCTGCTCCATCCAGGTATGCCCGCCGAGGATGCT
GTCGACCCGCTCGCGCAGACGCACGTGATCGTCGTCGATGATGTACAGGCTGTCCTCCGGCGCCTGGCCGGC
CAGTTGCTCCTGCAACGGCAGCACCCGGTAGCGTGCAGCGCGCTCGAACAGGGCGAACCAGGTATCCAGCAG
GCGGTCGTCGAGCAGCTCGGCTTCGGCGACGAGGAAATCGCTGACCCGCGCCAGCAGGTCGCTGTCGGGACG
GGACAAGGCAAGGCTCATGAGTATCCTCCGGGAAGAAAGTGCCGCTCAGAGGCTGATGTCGACCCCATGGCG
GGTCAGCCAGCGGTCCAGGTTCAGCAGGTAGGCCAGGCCGGCGGTCGGGCTCGCCGAGGCACGCGGGCTGGG
CAGCGGCGTGCCCTGTTCGAGAGCCTGGCGGACCCGCCCGGCGTCCACCAGTTCGAACAGCGGCGAGCGGCC
GTCGGCGAGCAGGCGGCCGACCCGCTCGCGCAGCAGCGCCAGGTAACGTGGGTCGGGGTTGGCCGGGAAACC
GCTCTTGCGCCGCTCCAGGATCGCCTGCGGCAGGTGCCCGCGCAGGGCCCGGCGCAGCAGGCTCTTGCTTTC
CCCGGCGACGCTCTTCAGCGCCCAGGGCAGGTTCCATACGTACTCCACCAGGCGGTGGTCGCAGAACGGCAC
GCGCACTTCCAGGCCGACCGCCATGCTCATCCGGTCCTTGCGTTCGAGCATCGCCGGCAACCAGCGGCTCAG
CGCCAGGTAGGCGACCTCGCGCTGGCGCCGCTGGGCGGCATCCTCGCCATCCAGTCGCGGCACTTCGGCGAG
GGCCTCGCGGTAGCGCGCCCGGATGTATTCCGGCGCCGCCACCCGTTCGGCGACCTCCCGCCGCAGCAGTTG
CCAGGGCCCGCTCTTGCCGGCCAGCCAGGGGAAGCCGTCGTGTGCGAGGGCGCTCGGGTCGTGGAAGAACGG
GTAGCCGCCGAACACCTCGTCGGCCGACTCGCCCGACAGCGCCACCGTGGTGTGCTCGCGGACCTGGCGGAA
CAGCAGGTAGAGCGAGGCGTCCAGCTCGCCCCAGCCGGGCAGGTCGCGGGCCTGGAGCACCGCCTCGTCCTG
TTCCAGCACCTCTTCCGGGGCGACCAGCACGGTACGGTGCGGCGTACCGAGGAAGTTCGCCGCCAGCTGCGC
ATAGGGTTCGTCCCAGCTGCTTTGCCAGGGCGTCGGGACGAAGCCGCGGCCTTCGCCGGGGAAGTCCACGGA
GAAGGTCGGCAGGCGCCGCGCGTCGCCATCCAGCGCGGCCACCGCGAAGGCGCTGATGGCGCTGGAGTCGAG
CCCGCCGGAAAGCAGGCTGCCCAGCGGGACGTCGGCCACCAGCTGCTCGGCCACTGCCTCGCGGAGCAACTG
GCCGGCGCGTTCGGCGCTGTCCTCGGCGCCCTCTTCGTGACGTTCCGCGCGCAGCGCCCAGTAGACCAGCTC
GCGCACACCATTGCGGTCGAAGCGCAGCGCCTGGCCCGGCCGGACCTGGCGCAGGCCCTTGTACAGGCCGTG
GCCGGGAGTCGGCGCGGTGGTCAGGGCGAACAGCTCGGCGATGCCGCTGGCGTCGAGCACCGGGTTGGCCTC
GGGGTTGGCGAAGATCGCCTTGGGTTCCGAGGCGAACAGCACGCCTCCGGCGGTCGGGTAGTAGTACAGCGG
CTTGACCCCGAAGCGATCGCGCACCAGCCACAGGCTCTGCTCGCGCTCGTCCCACAGGGCGAAGCCGTAGAT
GCCGCGGAGCCGGGCGAAGGAAGCCTCGCCCCATTGCAGATAGGCGCGCAGCACCACCTCGGTGTCCGAGCG
GGTACGGAAGACCTGGCCCAGCGTCTCCAGCTCGGCGCGCAGCTCGCGGAAGTTGTAGACCTCGCCGCTGTA
GGTCAGCGCCACCCGCCCGCCCGCCTCGGCAAGCATCGGTTGGGCGCCGTTCTCCAGGTCGATGATCGCCAG
GCGCCGATGGCCGAGCAGCGCGTGCCGCGACAGCCACAGGCCTTCGGCGTCCGGCCCGCGCGGGGCCAGGGT
ACGGGTCATGCGTTCGAGGATGCTGCGCTGCTCGCCGAGGTCGCGGCTCCAGTCGGTCCAGCCGGTGATTCC
ACACATGGATGA

Translation:

MGGASQDDADAPLGADGLVVQADLPRDDAQALGTVAQDMAGFADEVPGLAVAELMDDEVAAAADQFALDPLQ
PHVAHQAAGARARLLHPGMPAEDAVDPLAQTHVIVVDDVQAVLRRLAGQLLLQRQHPVACSALEQGEPGIQQ
AVVEQLGFGDEEIADPRQQVAVGTGQGKAHEYPPGRKCRSEADVDPMAGQPAVQVQQVGQAGGRARRGTRAG
QRRALFESLADPPGVHQFEQRRAAVGEQAADPLAQQRQVTWVGVGRETALAPLQDRLRQVPAQGPAQQALAF
PGDALQRPGQVPYVLHQAVVAERHAHFQADRHAHPVLAFEHRRQPAAQRQVGDLALAPLGGILAIQSRHFGE
GLAVARPDVFRRRHPFGDLPPQQLPGPALAGQPGEAVVCEGARVVEERVAAEHLVGRLARQRHRGVLADLAE
QQVERGVQLAPAGQVAGLEHRLVLFQHLFRGDQHGTVRRTEEVRRQLRIGFVPAALPGRRDEAAAFAGEVHG
EGRQAPRVAIQRGHREGADGAGVEPAGKQAAQRDVGHQLLGHCLAEQLAGAFGAVLGALFVTFRAQRPVDQL
AHTIAVEAQRLARPDLAQALVQAVAGSRRGGQGEQLGDAAGVEHRVGLGVGEDRLGFRGEQHASGGRVVVQR
LDPEAIAHQPQALLALVPQGEAVDAAEPGEGSLAPLQIGAQHHLGVRAGTEDLAQRLQLGAQLAEVVDLAAV
GQRHPPARLGKHRLGAVLQVDDRQAPMAEQRVPRQPQAFGVRPARGQGTGHAFEDAALLAEVAAPVGPAGDS
THG*

AnnotationID:5891 GeneID:5890

AnnotatorUID: diggins

Modification Date/Time: 2005-03-03 07:07:17

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11692

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28900