ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5886

TrivialName: PA14_37700

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_37700

PAO1 Ortholog Locus:

Sequence Length: 2520

Protein Length: 839

Start: 3356884

Stop: 3359403

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAP22952.1| (AY272046) hypothetical protein 1 [Rhizobium arachis] Identities = 174/548 (31%), Positives = 223/548 (40%), Gaps = 64/548 (11%)

Sequence:

ATGGCCTTCGGCGGAAACCTGTGGCGCCTGGGTCTGCCCCGCCTCGCGCGCCAGCAGGTCGCGCAGGCCCTG
CGCATCCAGCGGCCGGCTGAGCAGGAATCCTTGCAGTTCGTGGCATTGCTCGTCGCGCAGGATATGCATCTG
CCCTTCGGTCTCCACCCCCTCGGCGGTGACCCGCAGGTTCAGGGCGTTGCCGAGATTGATGATGGCCTGCAC
GATCGAACGGTCGCGCCCGGTCTTCTCCATGCTGGCGACGAAGCGCTTGTCGATCTTGATGCTGTCGAAGGG
ATAGGTGCGCAGGTAGCCGAGCGAGGAATAGCCGGTACCGAAGTCGTCCATGTTGAGGCGGACGCCCAGTTC
CTTGAGGGCCGTCATGGTCCGCAGCGCGCCGTCGACATCGTTGAGCATGACGTTCTCGGTGACCTCCAGCTC
CAGCCGGCGGGCATCCAGGTGGGCCAGGCGCAACGCCTCGCGCACCTGCCAGACGATATCGCCGGTCATGAA
CTGCGCCGGCGACACGTTCACCGAGACCATCACCTCGCCCGGCCAGGAGGCGGCGGTGGCGCAGGCCTCGCG
CAGCACCCAGTTGCCGATCTGCACGATCAGGTCGCTTTCTTCCGCCAGGCCGATGAACTCGTCCGGGCCGAT
CAGCCCGCGGCGCGGATGGTTCCAGCGGATCAGCGCCTCCGCCGAGGCGATCGTCTGTTCCTGCGCCAGGAA
GCGCGGCTGGTAGTACAACTCGAACTCGCCGTTCTGCAAGGCGGCGCGCAACTCGGTCTCGCGCAGCTTCTT
CTCGGCGAGATGGGAGTCCATCGCTTCCAAGTAGAAACGCCAGGTATTGCGCCCCGCGGCCTTGGCCTCGTA
CATCGCCACGTCGGCGCAACGCAGCAGGCCGCGCGGATCGCCGCCGTGCTCCGGCGCCAGGGCCACGCCGAT
GCTGGCGCCGACATGGAAGCTGTGCCCTTCGTAGGCGATCTCGCGGTTGATCACGTCGATCAGCCGGCTACA
GAACTTCTCGGTTTCCAGCTTCGACGACACGTGGGTACTGACCACCACGAACTCGTCGCCGCCGAGCCGGGC
AACCATGTCCTGGTCGCGGGTCGAGGCGCGCAGCCGCTCGGCGATGGCGTAGAGCACCGCGTCGCCGGCAGG
ATGGCCGTGCTGGTCGTTGATCGGCTTGAAGCGGTCGAGGTCGAGCATCAGTACCGCTACCGGCGACTTGCC
AGCCTTTTCCGCCAGCAGGCGTTCGAGGAACTGGAACAGCTTGTTGCGGTTCGGCAGGCCGGTCAGGGCATC
GTGCAGGGACAGATGCTGGATCTTCGCATGGGCTTCGACCTCGTCGGTGATATCGGCCGCCGTGCCGCGATA
GCCGCTGGCGACGCCGTTGCGGATCGCGCTGGCGCTCAGCTTGCCGACCCGCGCCTGGCCCTGGCTGTCGCG
GAAAGCGCAGACCAGGCTGGACGGCGTCTCGGCGTCGGGCAGCCCTTCCAGCCACTTGACGATGTTCACCGT
ATCGCTATCCAGCAACTCGTCCAGCCGCCGCCCGATCCAGGCCTCCGGCTGGTAGCCGGTGACGTCGCGGAA
GCGCACGGAGAGATAGGTGAAGACGAAATGCCCGTCGACTTCCCAGATCCAGTCCGAGGCCGCCTCGGCTAT
CGACTTGAAACGTTCCTCGCTGGCCAGCAGGGCCTGGTTGCTGCGTTTCAGGACCTTCTGCTGGCGATCTAC
CGCGCGGGCGTTGAGCACGGCGCTGCGGCTCAGCCAGAACAGCAGCCCGGCGGCGAGCACGAAGATCCCCAG
CAGCGGCAACGCGGTCTCCCGCAGCATGGCGCTACCCGGACGCGACGACACCCAGGCCAGGCGATGGGGAGT
GTCCTCCAGGGCCAGGCTTTCCTTGTCGCCCGCCGCGCCGCCGACCAACAGGTGCAGGTTGGCGATGCCGTA
GTCGCCGCCGAGCTTGGCCAGCTTCGCCGGGGTCAGCCGGTCGACGAAGACCATCACCGAGGCCTTGTCCAG
GTCGATGGGCGCATGATCGCTGGTGGGCTTGATCGCCGAGGCGACCAGGATCGCCGGTGCGCCGTCGAAGTC
GACGTAGCGGCTGATCGCCGCCTCGTCCACCGCGGCGCGGCGGGCGGCGCTGAGGATGTCTCCGGCATCGGC
GCCCAGCGAGTCGGCCAGCGAGCGCTCGGACAGCTCGCCCTCGAGCATGGCGTAGCGAGTGCCACGGTCGTC
GATGACGAAGACGCCGTCGTAGCCGTTGGTGGTGTAGAGCACCGAGCCGAGGTTGTTCTTGGTAAAGGCCCA
GTCCACGTCGACCCGGTTTCCCAGATAGACGTAGGCGTCGGTCCAGAACGAATAGGTGGTGGAGAACTGCTC
GGAATTTTCCCGGCGATTCTGCAGCGCCTTTTCCACGTAGAAATGGCTCTGCTCGATGGCGATGTCGTCCTG
CTGCCTGGCGATGTGCAGGATCGCCCAGCCGCATGCACCGAGGGCGAGGAAAAGGGCGGCCAGGAACATTAG

Translation:

MAFGGNLWRLGLPRLARQQVAQALRIQRPAEQESLQFVALLVAQDMHLPFGLHPLGGDPQVQGVAEIDDGLH
DRTVAPGLLHAGDEALVDLDAVEGIGAQVAERGIAGTEVVHVEADAQFLEGRHGPQRAVDIVEHDVLGDLQL
QPAGIQVGQAQRLAHLPDDIAGHELRRRHVHRDHHLARPGGGGGAGLAQHPVADLHDQVAFFRQADELVRAD
QPAARMVPADQRLRRGDRLFLRQEARLVVQLELAVLQGGAQLGLAQLLLGEMGVHRFQVETPGIAPRGLGLV
HRHVGATQQAARIAAVLRRQGHADAGADMEAVPFVGDLAVDHVDQPATELLGFQLRRHVGTDHHELVAAEPG
NHVLVAGRGAQPLGDGVEHRVAGRMAVLVVDRLEAVEVEHQYRYRRLASLFRQQAFEELEQLVAVRQAGQGI
VQGQMLDLRMGFDLVGDIGRRAAIAAGDAVADRAGAQLADPRLALAVAESADQAGRRLGVGQPFQPLDDVHR
IAIQQLVQPPPDPGLRLVAGDVAEAHGEIGEDEMPVDFPDPVRGRLGYRLETFLAGQQGLVAAFQDLLLAIY
RAGVEHGAAAQPEQQPGGEHEDPQQRQRGLPQHGATRTRRHPGQAMGSVLQGQAFLVARRAADQQVQVGDAV
VAAELGQLRRGQPVDEDHHRGLVQVDGRMIAGGLDRRGDQDRRCAVEVDVAADRRLVHRGAAGGAEDVSGIG
AQRVGQRALGQLALEHGVASATVVDDEDAVVAVGGVEHRAEVVLGKGPVHVDPVSQIDVGVGPERIGGGELL
GIFPAILQRLFHVEMALLDGDVVLLPGDVQDRPAACTEGEEKGGQEH*

AnnotationID:5887 GeneID:5886

AnnotatorUID: diggins

Modification Date/Time: 2005-03-03 06:06:51

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11685

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28892