ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5871

TrivialName: PA14_38120

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_38120

PAO1 Ortholog Locus:

Sequence Length: 1464

Protein Length: 487

Start: 3402021

Stop: 3400558

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens] Identities = 132/493 (26%), Positives = 165/493 (33%), Gaps = 107/493 (21%)

Sequence:

TTGCTGTGCATTAGAAAAAGAAGAAATCGAGGCAAGCATACCCATGTCGAATCCTCCCCCCACCGCAGAACG
AACCCAGCTTCGCAAGTCCCTCAAGCTGTGGCAGATCGTCATGATCGGGTTGGCCTACCTGACCCCGATGAC
CGTCTTCGACACCTTCGGCATCGTATCCGGGATTTCCCAGGGACACGTGCCCACCGCCTACCTGCTGGCCCT
CGCCGGCGTGCTGTTCACCGCGATCAGCTACGGCAAGCTGGTCCGCCAGTTCCCCACCGCAGGCTCGGCCTA
TACCTACGCGCAACGGGCGATCAATCCCCATGTCGGCTTCATGGTCGGCTGGTCGTCGCTGCTGGACTACCT
GTTCCTGCCGATGATCAACGCGCTGCTGGCGAAGATCTACCTGACCGCACTGTTCCCCGAGGTCGCGCCATG
GGTCTGGGTGGTGATGTTCGTGCTGATCATGACCCTCATCAACATCAAGAGCGTGAACCTGGTCGCCAATTT
CAACACCGTCTTCGTGCTGGTCCAACTGGCGATCATCGTGGTCTTCATCGGCCTGGTGATCCATGGCCTGAA
CAACGGGGAGGGGACCGCCACGGTGCTCAGCACCCAGCCGTTCTTCTCCGAGCACGCGCATCTCTCGGCGAT
GGTGGCGGGGGCGACGATCCTCTGCTTTTCCTTCCTCGGTTTCGACGCGGTGACCACGCTGTCCGAGGAAAC
CCGCGACGCCGCCAAGGTGATCCCGCGGGCGATCTTCCTCACCGCGCTGTACGGCGGGGTGATCTTCATCAC
CGTGTCGTATTTCCTGCAGTCCTATTTCCCGACCAACGTACGCTTCAAGGAACCCGACGCGGCGCTGCCGGA
AATCGCCCTGTACGTCGGCGGCAAGCTGTTCCAGTCGATCTTCCTCTGCGCCACCTTCATCAATACCCTGGC
GTCTGGCCTGGCCTCCCAGGCCAGCGTGTCGCGCCTGCTGTACGTGATGGGGCGGGACAATGTGCTGCCGGA
GCGGATCTTCGGCTTCGTCCATCCGAAATGGCGTACGCCGTCGATCAACGTGCTGATCGTGGGCATGGTGGC
GCTCTCGGCGATCTCCTTCGACCTGGTGACGGCGACCGCGCTGATCAATTTCGGCGCCCTGGTGGCCTTCAC
CTTCGTCAATCTCTCGGTGATCGTGCATTTCTATGTGCGCGGCGGGCGCAACCGCAGCCTCAAGGAGCATTT
CCACTACCTGGTCCTGCCGCTGCTCGGCGCGGCCATCGTCGCGGTGCTCTGGCTCAACCTGGAAAGCACCTC
GCTGGTGATGGGGCTGATCTGGGCCGGGCTGGGCTTCGGCTACCTGTTCTACCTGACCCGCAGCTTCAGCCG
TCCGCCGCCGCGCTTCCAGGAGAGCGAACTGAGCCCGACCCAGTGAGGCGAGCGGTGAATGGATTCAGCGAA
AAAGTGAAGGAAAAAGATTGGTAA

Translation:

MLCIRKRRNRGKHTHVESSPHRRTNPASQVPQAVADRHDRVGLPDPDDRLRHLRHRIRDFPGTRAHRLPAGP
RRRAVHRDQLRQAGPPVPHRRLGLYLRATGDQSPCRLHGRLVVAAGLPVPADDQRAAGEDLPDRTVPRGRAM
GLGGDVRADHDPHQHQEREPGRQFQHRLRAGPTGDHRGLHRPGDPWPEQRGGDRHGAQHPAVLLRARASLGD
GGGGDDPLLFLPRFRRGDHAVRGNPRRRQGDPAGDLPHRAVRRGDLHHRVVFPAVLFPDQRTLQGTRRGAAG
NRPVRRRQAVPVDLPLRHLHQYPGVWPGLPGQRVAPAVRDGAGQCAAGADLRLRPSEMAYAVDQRADRGHGG
ALGDLLRPGDGDRADQFRRPGGLHLRQSLGDRAFLCARRAQPQPQGAFPLPGPAAARRGHRRGALAQPGKHL
AGDGADLGRAGLRLPVLPDPQLQPSAAALPGERTEPDPVRRAVNGFSEKVKEKDW*

AnnotationID:5872 GeneID:5871

AnnotatorUID: diggins

Modification Date/Time: 2005-03-03 05:05:50

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15733

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28862