ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5849

TrivialName: PA14_38980

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_38980

PAO1 Ortholog Locus:

Sequence Length: 1575

Protein Length: 524

Start: 3473681

Stop: 3475255

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAD27872.1|AF135822_1 (AF135822) unknown [Azospirillum brasilense] Identities = 66/264 (25%), Positives = 94/264 (35%), Gaps = 48/264 (18%)

Sequence:

ATGCGTCCGATCAGCGCCTGGTTGATCCGCTGCAACTTGTGCCGCTCTTCTTCGAGGGCGACGACCCGCGCC
TGCAGCTCAGCGACGGACACCTCCACGGGGTCGGCCAATGGCGACCCCGGTGAAGGTCTGGTTGATATGCAT
GCCATTGAATTGCTCTCCGTAGGTGTTGAAGCCGATCACCTGCTGGCTGCGGAGAAACGCGGCGGTAGCTTG
CGTGTCACCGCCGACCTCCAGCTCCAGGCGCCGCAGGAAGCAGTCGCAACCGATGGTCAGCAACGGCGGTCC
GAGGCGCTCGTGGAGGCGGCGGAACTGCGCCTCCAGGTTGGGCAACAGCGGGCCGGTGCTCATCGCGGTGAG
AACGATGCCGTTCTCCACCGCACAGTAGAACGTCAGGCTCAGGTCCTCGTTGGCCTGCTGGATCGAGCGCAC
GTAATAGCGTTCGTCGACCCGCACCGCCAGCGGATGCGCGGAGAACAGGGCGAAATCCAGCGCCTGCGGTGC
CACCCCGACCAGCCGGGCGTATTCCAGCGCCGCCGGCTCGGCGTTGAGTTCGTGGACCCGCCGGCTGCCGCT
GTCGGCGCGGGTCACCACCAACTTTTCGGCGCGCGGCACCACGTGATGGGTGGTGAAGACCTCGAAGTCCAG
CCAGGTGTTGACCAGCACCACCACTGCCGCCCCGGTATGGAACTGGCCCTGGTGGTAGACATGGGTGTGGGT
CAGGTGCCGGTCGTCGCCGGCCGAGCCACCGAAATGCGGGATCGCGCCGAGCGCCGCGCCAAGCGCGGCGAG
CACCACCTCTTCGCGGCTGGACAGGCCGTCGAGCAGGGTCAGGGCGAAGCTGTGGTCCTTGATCGGCGCCAG
GCCGCCGCGGCGACAGCCGGCCACCAGGGTCTCGACCATCTGCTGCGCGTCCAGCAGGCTGAAGCGCTCCAT
TTCGTCGATCAGCGCGCTGCTGATGGCGAAGCTGCGCACGTCGAAGCCCACCGCGCTGACGCAGCCGCGCCC
GTAGCCCGCCGGAGTGATCTCGCCGGCGGTGGTGCAACCGACCAGGTCGATGCCGCCGAAGTAGCGTTCGAG
CATCTCGCCGAGGGCCGGCAGGTCGTATTCCGCGGAACAGAAGAACAGCACGAAGCCCAGGTGCGGATGGAT
AAGCTGGCGCGCCAGGTCCTGGGCCACCACTTCGACGTCGCGGGCGCTGGACATGCCCCTGCAGACCCCTTC
CCCCTGCCCTTCGTACATGCCCGCTCCCCCGTCGTTCCGCCTCGCCAGCATTCTACGAAGGGCGCCGCCGCG
GCCCCTATCCTACTTGGGTCGCGGCGGGGTCCTTCGAAAGTAGCGGTATCACCAGTTCAGTACGGCGCCGAG
GGCCACGGTGTCGGTGTCCTCGTCGAGCGCGGCACCGTCGCGCCCGTCGATCCGGTAGCGGTTCAGCTCGGC
GACCAGCTTGAGGTTGTCGTTGATCGTGCGGAAATAGGCGATGCCGCGACTCTCGTAGTCGGCCGCGGAACC
CAGGCCGTTGCCGTCGTCGACGGTCTTGCCGTAGGACAGCGCCAGGCGGTTCTTGCCCCATGA

Translation:

MRPISAWLIRCNLCRSSSRATTRACSSATDTSTGSANGDPGEGLVDMHAIELLSVGVEADHLLAAEKRGGSL
RVTADLQLQAPQEAVATDGQQRRSEALVEAAELRLQVGQQRAGAHRGENDAVLHRTVERQAQVLVGLLDRAH
VIAFVDPHRQRMRGEQGEIQRLRCHPDQPGVFQRRRLGVEFVDPPAAAVGAGHHQLFGARHHVMGGEDLEVQ
PGVDQHHHCRPGMELALVVDMGVGQVPVVAGRATEMRDRAERRAKRGEHHLFAAGQAVEQGQGEAVVLDRRQ
AAAATAGHQGLDHLLRVQQAEALHFVDQRAADGEAAHVEAHRADAAAPVARRSDLAGGGATDQVDAAEVAFE
HLAEGRQVVFRGTEEQHEAQVRMDKLARQVLGHHFDVAGAGHAPADPFPLPFVHARSPVVPPRQHSTKGAAA
APILLGSRRGPSKVAVSPVQYGAEGHGVGVLVERGTVAPVDPVAVQLGDQLEVVVDRAEIGDAATLVVGRGT
QAVAVVDGLAVGQRQAVLAP*

AnnotationID:5850 GeneID:5849

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 16:04:26

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11616

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28821