ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5847

TrivialName: PA14_39120

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_39120

PAO1 Ortholog Locus:

Sequence Length: 1620

Protein Length: 539

Start: 3487268

Stop: 3485649

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK11838.1| (AY027490) unknown [Agrobacterium tumefaciens] Identities = 106/399 (26%), Positives = 154/399 (38%), Gaps = 32/399 (8%)

Sequence:

TTGCGCGACGGGGACTCAGACGATCACGCCCTGGCTGCGCAGGTAGTCGTCATAGCTGCCGCTGAAGTCGGT
CACGCCGTTCTCGCCCAGCTCGATGATGCGGGTAGCCAGCGAGGAAACGAATTCGCGGTCGTGGCTGACGAA
GATCAGCGTGCCCGGATAGTTGTCCAGCGCCAGGTTCAGCGCCTCGATGGACTCCATGTCCAGGTGGTTGGT
CGGCTCGTCCATCACCAGCACGTTGGGACGCTTGAGGATCAGCCGGCCGAACAGCATGCGGCCCTGCTCGCC
GCCGGAGATCACTTTCACCGACTTCTTGATCTCGTCGTTGGAGAACAGCATGCGGCCGAGGGTGCCGCGCAC
CAGTTGTTCGCCGCCCTGGGTCCACTGGGCCATCCAGTCGAACAGGCTCATGTCGTCGGCGAAGTCGTCGGC
ATGGTCCTGGGCGAAATAGCCGACGTCGGCGCTGTCGGTCCATTTCACCTCGCCGCCGTCCACCGGCAGGTC
GCCGACCAGGCAGCGCAACAGGGTGGTCTTGCCGATGCCGTTGGGGCCGATGATGGCGACGCGCTCGCCGGC
CTCGACCTGCAGGCTCAGGCCCTTGAACAGCGGCTTGCCGTCATAGCCCTTGCTGATGTTTTCCACGGTCAC
CGCCTGGCGGTGCAGCTTCTTGTATTGCTCGAAGCGGATGAACGGGCTGACCCGGCTGGACGGCTTGACCTC
TTCCAGCTGGATCTTGTCGATCTGTCGGGCGCGGCTGGTGGCCTGCTTGGCCTTGGAGGCGTTGGCCGAGAA
GCGGCTGACGAAGGATTGCAGCTCGGCGATCTGCGCCTTCTTCTTGGCGTTGTCCGACAGCAGGCGCTCGCG
GGCCTGTTCGGCGGCGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTC
GGCCATGTGGGTGCAGACGCTGTTCAGGAAGTGCCGATCGTGGGAAATGATGATCATGGTGCTGTTGCGCGC
GGTGAGCACGCCTTCCAGCCAGCGGATGGTGTTGATGTCCAGGTGGTTGGTCGGTTCGTCGAGCAGCAGCAC
GTCCGGGTCCGAGAACAGCGCCTGGGCCAGCAGTACGCGCAGCTTCCAGCCGGGAGCGACGGCGCTCATCGG
GCCGAAGTGCTGCTCCAGCGGGATGCCCAGGCCGAGCAGCAGCTCGCCGGCGCGGGACTCGGCGGTGTAGCC
GTCGAACTCGGCGAACTGGACTTCCAGCTCGGCCACCGCCATGCCATCTGCCTCGCTCATTTCCGGCAGGGA
GTAGATGCGGTCGCGCTCGGCCTTCACCGCCCAGAGTTCCTCGTGGCCCATGATCACCGTATCGATGACGCT
GAAGTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGCACGTTGGGTTCCAGCATGACCTGGCC
GGCGCTCGGCTCCAGGTCGTTGCCGAGGATCTTCATGAAGGTCGACTTGCCGCAACCGTTGGCGCCGATCAG
GCCGTAGCGGTTGCCGTTGCCGAACTTGACGGAAACGTTCTCGAACAGCGGCTTGGCGCCGAACTGCATGGT
GATATTCGCGGTGGAGATCAACTTCTTTACCTATAG

Translation:

MRDGDSDDHALAAQVVVIAAAEVGHAVLAQLDDAGSQRGNEFAVVADEDQRARIVVQRQVQRLDGLHVQVVG
RLVHHQHVGTLEDQPAEQHAALLAAGDHFHRLLDLVVGEQHAAEGAAHQLFAALGPLGHPVEQAHVVGEVVG
MVLGEIADVGAVGPFHLAAVHRQVADQAAQQGGLADAVGADDGDALAGLDLQAQALEQRLAVIALADVFHGH
RLAVQLLVLLEADERADPAGRLDLFQLDLVDLSGAAGGLLGLGGVGREAADEGLQLGDLRLLLGVVRQQALA
GLFGGGHVLVVVAREQAQLAVVQVGHVGADAVQEVPIVGNDDHGAVARGEHAFQPADGVDVQVVGRFVEQQH
VRVREQRLGQQYAQLPAGSDGAHRAEVLLQRDAQAEQQLAGAGLGGVAVELGELDFQLGHRHAICLAHFRQG
VDAVALGLHRPEFLVAHDHRIDDAEVLVGELVLAQLAQAHVGFQHDLAGARLQVVAEDLHEGRLAATVGADQ
AVAVAVAELDGNVLEQRLGAELHGDIRGGDQLLYL*

AnnotationID:5848 GeneID:5847

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 15:03:24

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15712

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28817