ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5842

TrivialName: PA14_39370

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_39370

PAO1 Ortholog Locus:

Sequence Length: 1308

Protein Length: 435

Start: 3503594

Stop: 3504901

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC45363.1| (U56832) ORF5; no significant similarity with known prokaryotic or eukaryotic proteins [Aeromonas hydrophila] Identities = 61/224 (27%), Positives = 89/224 (39%), Gaps = 17/224 (7%)

Sequence:

GTGCAACAGGCGGTAGAAGGTCGGCCGCGACACCCCGAGCATCCGCGCGGCCACGCTGAGGTTGTCGCCGTA
GCGGGCCAGCGCGTCGCACATCGCCTGGCGCTCGGCGCAGAGCTTGTAGACCTCCAGGCTGGACAACGGCGG
GCCGTCGCCGCGCGCGCATTCCAGGCCGAGGTCCTGGGCCTCGATCTGCTTTCCCTCTGCCAGGACCAACCC
GCGACGCACCCGGTTGGCCAGTTCGCGGACGTTGCCCGGCCAGGCGTGCATCGCCATCGCCGCCAGCGCGTC
CTCGCTGAAGCGGCGCGGGCGGCGGCCGGTCTCCAGGCTGTAGAGCCGGGAGAAATGATTGGCCAGCAGCGG
CAGGTCCTCGCTCCGTTCGCGCAACGGCGCGGTGCCGACCTGCAGGACGTTGAGCCGGTAGTAGAGGTCCTC
GCGGAACGTCCCGGCGTCGATCGCCGCCTCCAGGTCGACATGGGTCGCCGCCAGCACCCGCACGTCCACCTC
GACCGGCCGGCTACCGCCGACCCGCTCGATCTGCTGTTCCTGGAGAAAGCGCAACAGGTTGGCCTGCAACTC
CAGCGGCAGGTCGCCGATCTCGTCGAGGAACAGGGTGCCGCCGTCGGCCGCCTCGATCCGTCCGACCTTGCG
CTGGTGCGCGCCGGTGAAGGCGCCCTTCTCGTGGCCGAACAGCTCGGACTGGATCAGGTGCTCGGGAATCGC
CCCGCAGTTGATCGCGACGAACGGCTTGTCCACGCGCCGCGACTGCCGGTGCAGGGTACGCGCGACCAGTTC
CTTGCCGGTGCCGCTCTCGCCCCGGATCAGTACCGGCGAGTCGGTCGGTGCCAGCTTCGCCAGCAGCCGGCG
CAGGTCGCGTACGGCCAGGCTCTCGCCGAGCAGTTCGTGCTCGCCCTCGGCATCGCCGGGCACCGTGCCGCG
CCCGCGCAGGCGGGCCATGCCGAAGGCGCGGCCGAGGGTCACCTGCACCCGCGCCATGTCGAACGGCAAGGT
ATGGAAGTCGAAGAACCATTCGCAGACGAAATCGCCGACGCCATTCAGCGGCAAGGTGTCCGGGCTGAGCAC
GGCGATCCACTCGGTGCCGCTGCGGCTGATCAGGTCCTTCACCGTCTCCGGCCGCTCCAGGTGGAACGGCCG
CAGGCGCAGCAGACCGACGTCGCAAGCGCGTTCGCGCGCCGTTTCCAGCGCGCAGCTGTCCACTGCCCAACC
CGCCTCGCGAAGGCCCGGCAACAGGCGCCGGCAATCGTCGCACGGGTCCACCACCAGCAGACGGCGGAGGTT
CGATGCATCTAA

Translation:

MQQAVEGRPRHPEHPRGHAEVVAVAGQRVAHRLALGAELVDLQAGQRRAVAARAFQAEVLGLDLLSLCQDQP
ATHPVGQFADVARPGVHRHRRQRVLAEAARAAAGLQAVEPGEMIGQQRQVLAPFAQRRGADLQDVEPVVEVL
AERPGVDRRLQVDMGRRQHPHVHLDRPATADPLDLLFLEKAQQVGLQLQRQVADLVEEQGAAVGRLDPSDLA
LVRAGEGALLVAEQLGLDQVLGNRPAVDRDERLVHAPRLPVQGTRDQFLAGAALAPDQYRRVGRCQLRQQPA
QVAYGQALAEQFVLALGIAGHRAAPAQAGHAEGAAEGHLHPRHVERQGMEVEEPFADEIADAIQRQGVRAEH
GDPLGAAAADQVLHRLRPLQVERPQAQQTDVASAFARRFQRAAVHCPTRLAKARQQAPAIVARVHHQQTAEV
RCI*

AnnotationID:5843 GeneID:5842

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 13:01:15

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15704

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28808