ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5841

TrivialName: PA14_39380

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_39380

PAO1 Ortholog Locus:

Sequence Length: 1449

Protein Length: 482

Start: 3506387

Stop: 3504939

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD55362.1| (AL939124) probable translational initiation factor [Streptomyces coelicolor A3(2)] Identities = 110/390 (28%), Positives = 132/390 (33%), Gaps = 67/390 (17%)

Sequence:

GTGCCGGCACTACAAGTACCTGCGCCATGGCTACTACTGCTCGCTGCTCGCCGAGGCGCGCGGGCACAAGGT
GATCCCCTCGGTGCGGACCATCAGCGAGCTGGCCAGGAAGTCGCTGTACAGCCTGGTCCTGGAGGACCTCGA
CCGCACCCTGGACAAGGCCCTGGCCGCGCACCCCTACGGCAGCACCGATGGTTTCACCCTGACCCTGTATTT
CGGCCGTACCGACATCGAGCCGTTGCAGGACCTGGCGCGACAGTTGTTCGAGGCGTTTCCCTGCCCGTTGCT
GCTGGTGGAGTTCAAGCGCAACCGCACCTGGCACATCGAGGGCATCAAGCCCGGCGCCATCCACAAGCTGCG
CGAGGATCAGGAGGACCTCTTCGCCAACGCCCTGGACAACTTCAGCCGGCAGATCTGGCGCAAGCCGCGTTC
GCGCAAGCCGTTCCGCTACGACCTGGCGATCCTCCACGACCCCGGCGAGGCGTTCCCGCCGTCCGATGCCAA
AGCGCTGAAGAACTTCGTGCGGGTCGGCCGCAGCCTCGGCATCGACGTCGACCTGATCGAGCGCAAGGACTA
TTCGCGGATCGCCGAGTACGACGCGCTGTTCATCCGCGAGACCACCAATGTCGCCGACCACACCTACCGTTT
CGCCAAGAAGGCCGAGAGCGAAGGGTTGGTGGTGATGGACGACCCGGTGTCGATCCTGCGCTGCACCAACAA
GGTGTACCTGGCCGACCTGCTGCGCAGCCACAAGCTGGGCATGCCGGCCACGGAGATTCTCTACAAGGAGAA
CCCGCAGGAACTGGAGAAGGTCGGCGAGCGCCTGGGCTTCCCGCTGGTGCTGAAGATTCCCGACGGCAGCTT
CTCGCGCGGGGTGATCAAGGTGGAGGACCAGGAGCAGTTGCTGGCGGCCAGCGCCGAGCTGTTCGAGCGCTC
GGTGCTGATCCTTGCCCAGGAGTTCTTCTATACCGAGTACGACTGGCGTATCGGCGTGCTCAACCGCAAGCC
GATCTTCGCCTGCCAGTACTTCATGTCCAAGGGCCACTGGCAGATCTACGACCACAGCCCGGACGCCGAGGA
GGTCAGCGGAGATTTCCGCACCATGCCCGTGCACGAGGCGCCGCGCAAGGTGGTGGAGCTGGCGGTGAAGAC
CGCCAATCTGATCGGCGACGGCCTCTACGGGGTGGACCTGAAGCAGGCCGGCGACAAGGTGGTGGTGATCGA
GGTGAACGACAACCCGAACATCGACTGCGGGGTGGAGGATGTCTACCTCGGCGACGACCTCTACAAGCTGGT
CCTGGAGGAGTTCGTCCGGCGCCTGGAAGTCAAGCGTCGCGGCTACGACTGATAAGACGATTTCGGCATTGG
CGATATAAACAAAGATTCACTTTCGCGCGTCAAAAAATTGCTAGATTTTCCTTTCAGAGCGCCAGCATGCCG
TTTTTATGA

Translation:

MPALQVPAPWLLLLAARRGARAQGDPLGADHQRAGQEVAVQPGPGGPRPHPGQGPGRAPLRQHRWFHPDPVF
RPYRHRAVAGPGATVVRGVSLPVAAGGVQAQPHLAHRGHQARRHPQAARGSGGPLRQRPGQLQPADLAQAAF
AQAVPLRPGDPPRPRRGVPAVRCQSAEELRAGRPQPRHRRRPDRAQGLFADRRVRRAVHPRDHQCRRPHLPF
RQEGRERRVGGDGRPGVDPALHQQGVPGRPAAQPQAGHAGHGDSLQGEPAGTGEGRRAPGLPAGAEDSRRQL
LARGDQGGGPGAVAGGQRRAVRALGADPCPGVLLYRVRLAYRRAQPQADLRLPVLHVQGPLADLRPQPGRRG
GQRRFPHHARARGAAQGGGAGGEDRQSDRRRPLRGGPEAGRRQGGGDRGERQPEHRLRGGGCLPRRRPLQAG
PGGVRPAPGSQASRLRLIRRFRHWRYKQRFTFARQKIARFSFQSASMPFL*

AnnotationID:5842 GeneID:5841

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 13:01:20

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15702

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28806