ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5830

TrivialName: PA14_39740

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_39740

PAO1 Ortholog Locus:

Sequence Length: 1341

Protein Length: 446

Start: 3542164

Stop: 3540824

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAB84182.1| (AL162754) IgA1 protease [Neisseria meningitidis Z2491] Identities = 76/343 (22%), Positives = 142/343 (41%), Gaps = 40/343 (11%)

Sequence:

ATGGGCCTTCAGTGTAATCGCCCCGGGCGCAGGCAGCGCGCCCTGTCACCAACTGGCGGGCAGCATCCCCAG
TGCCGAGGCGATCGCGTAGACCCCGCTGGAGGCGAACACCAGGACGATCAGCCCCTGTATCAGCGGATGGGC
ATACCAGCCGCAGCTGAATGCCGGCAGTTGGTCGCCGTGGCGCCGCGCCGCGTTGAGCAGGAGGATGGGGAT
GATGCCCATCAGTACGCCGCCGAAGGTACCGGCGAAGTACAGCGCGTTCACGAAGCCGCCGAGCCCCGCATA
GGCCAGCAGGAACGGCGGGACCGAGACCGCGGCGAGCACCGCCAGGCGTTTGCGCCGGTTGGTTTCGCTGCC
CAGGCGGAAGTGGTCGAAGATATTGGTGAACAGGCACCCGCCGAGTCCCCAGTAGGAGGTCAGCATCGCCAG
CAAGGCGAAGGTGTTCGCCACGTAGTAGGCCCATTGGCCGAGGGAGCGTCCCCAGCTCAAGGTCGCCACCTC
GCTGAGGTTGTCGGGGCCGACCAGGGCGATGACCGAGGCAGGAATGGCCGCCACCAGCAGGAAGGTCAGCAG
CATGCCGACCACGATCAGGCGCGGCACGCGCGCGGGGGTTGCCAGGTTGCCGCGCACCAGCTCCGGAACCAG
GAACTGCGCGCCGAACACGAAGACCGCCAGGTTGAACACTGGAACCACGTATTGCCACTGGCTCTGCCAAAG
GTGGGCGAGACGGGCGTCGTCGTGCATCAGGGTAGCGCCGATGAGGATGCAGACGATGGCCACCATGCCGGC
GCTGATCAGCTTCTCGCCCACGCCGAGCGCCTTCAGGCCCAGGTAGAGCACCAGCGCCGAGGGGACGAAGAA
GATCAGGCTGCCGACCTCGCGCGTGAGGCCGTACTGGCCGAAGAACTCGAGCATGATGTTGCCGCTGCCGGT
CATGTAGGCGACCAGGGCCCCGTAGCTGTTGGCCGCCACCGCGATGAAGATCAGCCAGCCGCCGAGCGGGCC
CAGGTAACGCCGGGAGAGGCCGCTGAGCTGGTTGTTGCCGCGGGTCCTCAGGCAGGCTTCGGTCACGTAGAG
CATGGTGACGATGCAGAAGAGGCAGGTCAGGGCCAGGCATACCAGCAACGGCACGTAGCCGACCTTGCGGGC
GGCGTAGGCCATGCTCAGCACGCCGGCGCCGATGTTGGTGCCGATGATGATCGCGATCGTCTCGAGCGAGCC
CAGGGGATGGGCCTTGAGGCCCGATGCGTTGTCGTTCGCTTCTCGCATACCCATTTCTTGTTTCCTCTGTCA
GGGCGGTGGAGTTCGGTTCTTCGGGGTCAGTCGAAGATCAGGTAG

Translation:

MGLQCNRPGRRQRALSPTGGQHPQCRGDRVDPAGGEHQDDQPLYQRMGIPAAAECRQLVAVAPRRVEQEDGD
DAHQYAAEGTGEVQRVHEAAEPRIGQQERRDRDRGEHRQAFAPVGFAAQAEVVEDIGEQAPAESPVGGQHRQ
QGEGVRHVVGPLAEGASPAQGRHLAEVVGADQGDDRGRNGRHQQEGQQHADHDQARHARGGCQVAAHQLRNQ
ELRAEHEDRQVEHWNHVLPLALPKVGETGVVVHQGSADEDADDGHHAGADQLLAHAERLQAQVEHQRRGDEE
DQAADLAREAVLAEELEHDVAAAGHVGDQGPVAVGRHRDEDQPAAERAQVTPGEAAELVVAAGPQAGFGHVE
HGDDAEEAGQGQAYQQRHVADLAGGVGHAQHAGADVGADDDRDRLERAQGMGLEARCVVVRFSHTHFLFPLS
GRWSSVLRGQSKIR*

AnnotationID:5831 GeneID:5830

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 11:11:05

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11582

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28786