ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5828

TrivialName: PA14_39840

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_39840

PAO1 Ortholog Locus:

Sequence Length: 1674

Protein Length: 557

Start: 3552912

Stop: 3551239

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens] Identities = 129/442 (29%), Positives = 168/442 (38%), Gaps = 85/442 (19%)

Sequence:

ATGTACGGCCACCAGGGTGCCGGCGGCGGCACCCTGTTCCTCGGCGCGCACGGCATTGGCGTTGAGCGCCGA
GACTGCCGGGAACACCCAACCCATGCCCGCCGCGGCGACGAAGAAGGCCAGCCAGAGCAGCGGCGGCGAGTC
GGCGAAGCACACGGCGGCGAAACCGATGGCGGCGACCAGCCCGCCGACCCGGATCAGTCGCGGCGGTGGCCA
GTCCAGGCGGCGCACCAGGAGCTGGGCCAGGATCAGCGCGACGCCCACGGCGGTCAGGGCGATGCCGGCCAC
CCGCGCGGCGTCGGCGGAATCCAGGCGCAGCCGGTCGAGGGCGAAGAAGCCCACGGTGATCTGCGCCACGGT
GACGCTGAACATCGCCACGAAGCCCACCGCCAGCGGCCGCCGCAGGCGGCGGTCGCCGATCGCCAGGGCGGC
GCCGCGGTTCGGCTGGCGACGCTCCTCGCGCGGCAGCCAGCGCCAGAGCGCCAGCAGGGCGACCAGGGGCAG
CGCGCCGGTGACCAGCAACGGCAGGACCAACCCGTGAGTCGCCAGCAGTCCGGCCAGCCCCGGCCCGATCAC
CATGCCTATCGCGCTGGCCGCGCCGAGTCCGGCCAGCGCCGCGGCGCGTCGTTGCGCCTCGACGTGATCGGC
CACCAGTGCCGCCGTGCAGGCTGGCACCGCGGCGTAGAAACCGCCGGCGAGGCCGCGCAGGAGAACGATACC
GGCGAAGGCGAGCAGGGTCGGCAACGTCCAGTGCAAGGCGAGCACGATGAACAGGCAGAGCGAGGCGTAGGA
GAGGGCGAAGCCGGCCAGCCCGCCGAGCAGTATCCGCCGTCGCCCATGCCGGTCGCTGGCGATGCCCCAGGG
CCGCGCCGCGAGCATCCAGGCGATGCCGCCGACGGTCACCGCGGCGCCGGCCTGCCAGGGCGCCAGGCCGAG
CTTGCGGGCGAGCGGGCCGACCAGGGCGACGAAGGACATCACCGCGAGGGTGCAGACGAAGGTCTCGAACAT
CAGCGGACGCAGGTCCAGGGTGTTGGCGGAGGGCGGCGGGGTGGTCATCTCAGGGATTCCTTCGGGTTCGCG
GCAGGCGCAGCCAGACCCAGCCGACCAGCACCAGCGGAGTGCCCAGGGCGAGCCAGGAGAGCAGGTCGTAGA
GGCCGTCGCCGAGCAGCGCCGAGAGCAGCCCGAAGAGGCCGAGCAGGGCCAGCAGCAGGGGCCAGCGGAAGA
TCATCCAGAGACCGCGCCTCATGCCTTGCCCTCCGTCGCCAGGCTGCCGTCCGGCAGTTCCGCCAGGCGCTT
CTCCAATGGCGTCTTGCGTCGGCCGAGCCAGAGGTAGAGACCGCTGGCGAGGATGACGATGCTGACGAGGTC
GAGCAGCGCCCAGACGATCTTCAGCGGCATGCCGCCGTAGTCGCCGAAGTGCAGCGGCTGCGACAGCAGGAG
CGTCTTCACGTACAGCGGCATCTCGCGCATGTCGGTGAGTTCGCCGCTCTGCGCGTCGATCAGTGCCGGCTT
CAGCAGGCGCTCGGTGAGCGGCGTGTTGCCGCGCATGAACACCGCATAGTGATGCTGGCTGCTGAACTGGGT
GCCGGGGAAGCCGACGAAGCTGACCTCCATGTCCGGCGCCGCCCGGCGTGCCGTGGCCAGGGCCGCGTCGAG
CGAGCCGAGGCGCTGTAG

Translation:

MYGHQGAGGGTLFLGAHGIGVERRDCREHPTHARRGDEEGQPEQRRRVGEAHGGETDGGDQPADPDQSRRWP
VQAAHQELGQDQRDAHGGQGDAGHPRGVGGIQAQPVEGEEAHGDLRHGDAEHRHEAHRQRPPQAAVADRQGG
AAVRLATLLARQPAPERQQGDQGQRAGDQQRQDQPVSRQQSGQPRPDHHAYRAGRAESGQRRGASLRLDVIG
HQCRRAGWHRGVETAGEAAQENDTGEGEQGRQRPVQGEHDEQAERGVGEGEAGQPAEQYPPSPMPVAGDAPG
PRREHPGDAADGHRGAGLPGRQAELAGERADQGDEGHHREGADEGLEHQRTQVQGVGGGRRGGHLRDSFGFA
AGAARPSRPAPAECPGRARRAGRRGRRRAAPRAARRGRAGPAAGASGRSSRDRASCLALRRQAAVRQFRQAL
LQWRLASAEPEVETAGEDDDADEVEQRPDDLQRHAAVVAEVQRLRQQERLHVQRHLAHVGEFAALRVDQCRL
QQALGERRVAAHEHRIVMLAAELGAGEADEADLHVRRRPACRGQGRVERAEAL*

AnnotationID:5829 GeneID:5828

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 09:09:30

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11578

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28782