ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5820

TrivialName: PA14_40140

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_40140

PAO1 Ortholog Locus:

Sequence Length: 1389

Protein Length: 462

Start: 3578124

Stop: 3579512

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA55649.1| (X79027) unknown [Microbacterium ammoniaphilum] Identities = 119/413 (28%), Positives = 143/413 (34%), Gaps = 103/413 (24%)

Sequence:

ATGCAAGGTCGAATTTCCAATATATTGGACAGTGACTATCATGTACGAGAAAAATCCGCCAGGGCCACCCAT
GGATATCGACGAACTGATTGCCCGACGCCTAGCCGCCCTGCGCAAGGAGCGCGAGCTGACCCTCGCCCAACT
GGCCGAACGCTGCGCGGTGAGCAAGGCGATGATCTCGCGCATCGAGCGCAACCAAAGCAGCCCCACCGCCAG
CGTCCTCGGCCGTCTCGCCGGCGGCCTGGGGGTCGCCCTCTCCGAGCTGCTCGGCGACGCGCAGGCGCCGGC
CGAACCGCTCTGCCGGCGCGCGCAGCAGGAAGTGTGGGAAGACCCGGCCAGCGGCTACCGCCGCCGCCAGGT
CGGCGCTCGCGATCCGCGCAGCGGCTGCGAAATGGTGGAAGTGGAGATCCCggCGAACGCCCGCCTCGACTA
TCCCCGCTGGGGCGGCCGGCCCTACCGGCAGCGCCTGTGGCTGGTCGAGGGTGCGCTGCGGGTGGACTACGG
CGAGCAAACGTTCCACCTGCAACGCGGCGACCGCCTGGACTTCGGCGTCGACCGCGCGGTGACCTTCGCCAC
CGCCGGGCAAGCCTGCCGCTACCTGCTGGTGATCCTCCACGACTAGTCGTGCGGCTTTTTCCGCCGGCGCTC
CGGCGACCAGTCGAGGGCGCCGACCCGGTGCAGGTAGAACAGTCCGACCAGCAGCAGGGAGACGAACAGCGT
CGCCTCGACGAAACCCGCCCAGCCATTCTCCCGCAGCGACACCGCCCAGAGGTAGAGGAACGGCATCTCGAT
GCCGAAGATCACGAACAGCATGGCGACCAACGCGTACTTGACCGAGAAGCGCAAGCGCGACGAGCCGGTGGA
ATCAACCCCCGACTCGAACGGCAGGTTCTTCGCCCGGCCATGCGACCGGCCGCCCAGCACCCGGCCCAACCC
CAGCATGAGCAGGCAAAGGGCGAGCGCGCCGAAGAGGTAGGCGAGCAAGGCCCAGGTCGCGGGAGCGAAGGA
TGCGTACATGGTGGTCACCCCTCAGCCCTGGCGGGTCGCCAGCTTGAGAATGACGATGCCGGCCACGATCAG
CCCCACCGCCAGCAGCCGCAACGGGCTCGGGCTTTCGCCGAAGAGCAGGATGCCCAGGGCGAAGGCGCCGAC
CGCACCGATGCCGACCCAGATGGTGTAGGCCGTGCCGAGGGGCAGGGTTTTCATGGAAACGGCCAGCAGGCC
GAAGCTGAGGATCATGAACAGCAGGGTGACCAGGCTTGGCCACAGGCGGGTGAAGCCGGCCGACTCCTTCAT
GGCCGTGGCCCAGACGATTTCGAAGACACCGGCGAGCAAGAGATAGATCCACGCCATTTTCAGCCTCTCTGC
AGGGTCGTCCCCGCGCAATGA

Translation:

MQGRISNILDSDYHVREKSARATHGYRRTDCPTPSRPAQGARADPRPTGRTLRGEQGDDLAHRAQPKQPHRQ
RPRPSRRRPGGRPLRAARRRAGAGRTALPARAAGSVGRPGQRLPPPPGRRSRSAQRLRNGGSGDPGERPPRL
SPLGRPALPAAPVAGRGCAAGGLRRANVPPATRRPPGLRRRPRGDLRHRRASLPLPAGDPPRLVVRLFPPAL
RRPVEGADPVQVEQSDQQQGDEQRRLDETRPAILPQRHRPEVEERHLDAEDHEQHGDQRVLDREAQARRAGG
INPRLERQVLRPAMRPAAQHPAQPQHEQAKGERAEEVGEQGPGRGSEGCVHGGHPSALAGRQLENDDAGHDQ
PHRQQPQRARAFAEEQDAQGEGADRTDADPDGVGRAEGQGFHGNGQQAEAEDHEQQGDQAWPQAGEAGRLLH
GRGPDDFEDTGEQEIDPRHFQPLCRVVPAQ*

AnnotationID:5822 GeneID:5820

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 07:07:47

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11562

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28766