ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5817

TrivialName: PA14_40360

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_40360

PAO1 Ortholog Locus:

Sequence Length: 1887

Protein Length: 628

Start: 3607311

Stop: 3609197

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK22415.1| (AE005715) methyl-accepting chemotaxis protein McpB [Caulobacter crescentus CB15] Identities = 78/311 (25%), Positives = 120/311 (38%), Gaps = 36/311 (11%)

Sequence:

ATGCCTTCCAGGGCGCTGGGCGACGGGGTGAAGCGCAGGTCGAGGTCGCCGCGCTTGGCGCTGAACTCGCAA
AGCGCGCGCACCGCCACCTGGTACAGCGCCTCGCCGCCCTGCTCAGTCATCGACATGCCAGCGCACGTAGCA
GACCGCCACCGGCATCTCCCGCTCGCGGCAGAATTGCAGCCAGCGCAACTGGTTGTCCTGCAGGCGGTCGCC
CGGTCCCTTGACCTCGACCATCCGGTAGCGACGCTGCGCCGGCCAGAACTGGATCAGGTCCGGCAGGCCGGC
GCGGTTGCCCGGGATATCCTCCAGCAGGCGTTCGAACCAGGCGCGCAGGTGGGCCGCCGGCAGGCAATCGAG
CGCCTGTTCGAGCAGTTCCTCGCCAAGCAGCTCCCAGTAGACGAAGGGCGACTGCAGGCCGAACTTGTCGCG
GTAGCGACAGCGGATCGCGTCGCGGTAGCTGCCGTCCTCCAGCCGTCCCAGGCAGGCCTCGAACAGGGCGGC
GCGGCGCTGGCGGAAGTCGGCGCTGTGCAGGTCCGCCGGCGCGCTGTGGAAGGGATGGAAGAACGCCCCGGG
AATGGCGGCGAAGATCGCCTCCCAGCAGAGCAGCCCGAACAGCGAATTGATCAGGCCGTTCTCGACGTAGTG
CACCGCGCAACCGGGCTCTTCCAGGTGCTCGCGGACCGCCCACTCGACGCTACAGGGTTCGCTCGGGAACGC
CAGGCACAGGTCCAGGCGTTCGATTTCCGGAGCCGCCCGCGCCTGTCGCGGCAGGCCGAGCTTGCCTTGCAG
GCGCGGCAGCAATCGGGCCAGGCCCTGGCGTTCGGCGTCGCTTTCCGGCGCACAGCTGGCCTCCCGCGCCAA
TGCATGGGCTTCGGCGAAGCGCTCGCCACGTTCCAGGCTGCGAATCGCCCGCAGGCGCGCGCCGGGGTGGCT
GGATTGGCGATAGAGCCGCTGGGCCAGGTCGAAATCCCGCTGCTTTTCGCAGTGCTGGGCGAACTGGAACAG
CAGCTTGACCCGCCGCCCTTCCAGCCAGGGATTGGCGTAGGGTTCGCCCGGCAGGCCGGCGAGCAGTTCCTC
CAGCGGCTCGCCGAGGTCGAAGCGCTGGCGGCAGTCGAACAGGTGGAGATAGGCGTCGACGTCGGCACGCAG
GCGAAAGCCGCGGGAATCGGCGGAAAACTCGACGCTTTCGTAACGATAGATGCCCAGGTCGGCAAGGACGAA
CTCCGACCAGTCCTGCCACAGATTGCCGAAATACATCAACCGCAAGCGGTCGCAGAGCGCCATGCAGCGCAA
CTCGTAGACCGGCTCGGCGAAGTCGGCCTGCCACTCGGCGAGCCGCCGCGCCTCGGGGAACAACGGCTGGAG
CCGTTCCAGCAGCGCATCCTTGCGCAGGTTCGCGCGCCCGAGATGGTCCCTGAACAGCTGCGACAACTCATC
CTTCTTCAGCAAGCCGAACAGTTGCGCCAGTTCCAGGGCCGGCTGCGCGTCCACCCAGCCCAGTGCCAACAG
CGGTTGCACGGCGGCGCGCGTGTCGCCGATCTCGGCATAGGCCAGCTTGCCTTCGCGGAACAGCGTGCCCTT
GCGCATCACCATGCGCACCAGCAGGGCCTGGCTGGCCTCGGGCAATTCGGCGAACGCGGCGATGAAGGCACG
TTCCTGATCGTCGAGCAGATCGGCATAGCGTTCGCCGATCCAGGCGAGTACCGCGCGGAAGTTGTGCAGGTA
GTAGAAGGGTTCGGGAAGCGCTGGGAAATTCACGGGAAGCGGAGCCTGGTACTGTTCATGCATACAGATACC
AGCGCCCCCACGGCTTGGCAATGCGCATCCGATCAAGCGTCGCCGGCCTGGCGACGACTATCCACGCACAAG
GCATTCGTTATATAA

Translation:

MPSRALGDGVKRRSRSPRLALNSQSARTATWYSASPPCSVIDMPAHVADRHRHLPLAAELQPAQLVVLQAVA
RSLDLDHPVATLRRPELDQVRQAGAVARDILQQAFEPGAQVGRRQAIERLFEQFLAKQLPVDEGRLQAELVA
VATADRVAVAAVLQPSQAGLEQGGAALAEVGAVQVRRRAVEGMEERPGNGGEDRLPAEQPEQRIDQAVLDVV
HRATGLFQVLADRPLDATGFARERQAQVQAFDFRSRPRLSRQAELALQARQQSGQALAFGVAFRRTAGLPRQ
CMGFGEALATFQAANRPQARAGVAGLAIEPLGQVEIPLLFAVLGELEQQLDPPPFQPGIGVGFARQAGEQFL
QRLAEVEALAAVEQVEIGVDVGTQAKAAGIGGKLDAFVTIDAQVGKDELRPVLPQIAEIHQPQAVAERHAAQ
LVDRLGEVGLPLGEPPRLGEQRLEPFQQRILAQVRAPEMVPEQLRQLILLQQAEQLRQFQGRLRVHPAQCQQ
RLHGGARVADLGIGQLAFAEQRALAHHHAHQQGLAGLGQFGERGDEGTFLIVEQIGIAFADPGEYRAEVVQV
VEGFGKRWEIHGKRSLVLFMHTDTSAPTAWQCASDQASPAWRRLSTHKAFVI*

AnnotationID:5819 GeneID:5817

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 07:07:19

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11557

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28761