ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5813

TrivialName: PA14_40500

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_40500

PAO1 Ortholog Locus:

Sequence Length: 1545

Protein Length: 514

Start: 3619401

Stop: 3617857

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC17961.1| (AP005217) hypothetical protein [Corynebacterium efficiens YS-314] Identities = 98/397 (24%), Positives = 128/397 (32%), Gaps = 95/397 (23%)

Sequence:

ATGGCTGGCCACCAGCGCCTCGACGAACGAGTAGGTGAGCGTGCCGTCCTCGTTGATCGCCCGCCACATCAG
GCCCTGGGTGATGCCATTGACCCACATCGAGGCGATGTACAGCACGGTGCCGATGGTGGCCAGCCAGAAGTG
CGCGTTGATCAGGCCGACGCTGTGCATCCGCTCGCGGCCCCAGAGCTTCGGGATCATGTGGTAGAGCGTGCC
GATGGAGATCATCGCCACCCAGCCGAGGGCGCCGGCGTGGACATGGCCGATGGTCCAGTCGGTGTAGTGGGA
CAGCGAGTTGACCGTCTTGATCGCCATCATCGGGCCTTCGAAGGTGGACATGCCGTAGAACGCCAGGGACAC
CACCAGGAAGCGCAGGATCGGGTCGTCGCGCAACTTATGCCAGGCCCCGGAGAGGGTCATCATGCCGTTGAT
CATGCCGCCCCAGCTCGGTGCCAGGAGGATCAGCGACATCACCATGCCGAGCGACTGCGCCCAGTCCGGCAG
CGCGGTGTAGTGCAGGTGGTGCGGACCGGCCCAGATGTAGATCGAGATGATCGCCCAGAAATGCACGATGGA
CAGGCGATAGGAGTAGATCGGTCGCCCGGCCTGCTTGGGCACGAAGTAGTACATCATGCCGAGGAAGCCGAC
CGAGAGGATGAAGCCGACCACGCTGTGCCCGTACCACCACTGGATCATCGCGTCGGTGGCGCCGGAATAGGC
CGAGTAGGACTTGCCCAGGCTCACCGGCAGCAATGCGTGGTTCACGATATGGACCATCGCGGTGACGATGAT
GAAGGCGCCGTAGAACCAGTTGCCGACGTAGATGTGCTTCACCTTGCGGCGGGCGATGGTGCCGAAGAACAG
GTAGGCATAGACCACCCAGACGATGGCCATCCACAGCGCCAGTGGCCATTCCATCTCGGCGTACTCCTTGGA
GGTGGTGTAGCCCAGCGGGTAGCTGACGATCATCCCCACGATCGCCGCCTGCCAGCCCCAGAACACGAAGCG
CGCCAGGACGTCGGAGATCAGCCGCACGCCGCTGGTGCGCTGCACCACGTAGAAGGAGGTGGCGAACAACGC
GCTGCCGCCGAAGGCGAAGATCACCAGGCTGGTGTGGATCGGGCGGATGCGGCCGAAGCTGGTCCAGGGCAG
GTCGAGGTTGAGCGCCGGCCAGACCAGCTGGGCGGCGATGAACACCCCCAGGCCCATGCCGAGGATGCCCCA
GACCAGGGTCATCAGGGTGAACTGGCGGACGACGTCGTAGTTGTAGCCGTCCGGATCTTTTCTGCTATCCGT
ATCGTTCATGGTCGCTGGCACGCCGGGCCCCGGGGTCCGGCCGGCTGGCGAGCAGGCGCGACCCTCGGGTCC
TCGTTGGGTTATCGGTATTTTTCTGGGTATCCCGTTGCCGGGTCGATGGAGTGCGGAGGTCGGATCTTCGTC
TGGAAGGCTCGGAACAGACGGCTCATGGCACTGGTGGACATTCTAGGAGGGGAGCTTTATTCGTCTCCAACG
AATAATGTTGCTATTACAGTGCAAAATTATTGA

Translation:

MAGHQRLDERVGERAVLVDRPPHQALGDAIDPHRGDVQHGADGGQPEVRVDQADAVHPLAAPELRDHVVERA
DGDHRHPAEGAGVDMADGPVGVVGQRVDRLDRHHRAFEGGHAVERQGHHQEAQDRVVAQLMPGPGEGHHAVD
HAAPARCQEDQRHHHAERLRPVRQRGVVQVVRTGPDVDRDDRPEMHDGQAIGVDRSPGLLGHEVVHHAEEAD
REDEADHAVPVPPLDHRVGGAGIGRVGLAQAHRQQCVVHDMDHRGDDDEGAVEPVADVDVLHLAAGDGAEEQ
VGIDHPDDGHPQRQWPFHLGVLLGGGVAQRVADDHPHDRRLPAPEHEARQDVGDQPHAAGALHHVEGGGEQR
AAAEGEDHQAGVDRADAAEAGPGQVEVERRPDQLGGDEHPQAHAEDAPDQGHQGELADDVVVVAVRIFSAIR
IVHGRWHAGPRGPAGWRAGATLGSSLGYRYFSGYPVAGSMECGGRIFVWKARNRRLMALVDILGGELYSSPT
NNVAITVQNY*

AnnotationID:5815 GeneID:5813

AnnotatorUID: diggins

Modification Date/Time: 2005-03-02 06:06:18

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11549

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28753