ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5805

TrivialName: PA14_40760

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_40760

PAO1 Ortholog Locus:

Sequence Length: 1869

Protein Length: 622

Start: 3639526

Stop: 3637658

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC16114.1| (AF010496) methyl-accepting chemoreceptor [Rhodobacter capsulatus] Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 30/195 (15%)

Sequence:

ATGATTCGCTGCATATACGCGCTCCTTGAACGGGTCGATACCGATACGGCGGAAGGTGTCGATGAAGGGTTC
TTCCTCGGTCCGGCGTTCCACGTAGACCTGGATGATCTTGTCGATCACGTCGGCCATCTGCTCCTGGGCGAA
GGACGGGCCGAGGATCTGCCCGAGGCTGGCGTCGCGCGCCGAGCTGCCGCCGAGGGAGACCTGGTAGAACTC
CGCGCCTTTCTTGTCGACCCCGAGGATGCCGATGTGGCCGACATGATGATGGCCGCAGGCGTTCATGCAGCC
GGAGATGTTCAGGTCGATGTCGCCGATGTCGAACAGGTAGTCGAGGTTGTCGAAGCGGCGCTGGATGGCCTC
GGCGATCGGGATCGACTTGGCGTTGGCCAGGGAGCAGAAGTCACCGCCCGGGCAGCAGATGATGTCGGTCAG
CAGGCCGACGTTGGGGGTGGCGAAGCCCAGTTCGCGCAGTTCGCCCCAGAGGGCGAAGAGTTCGCCCTGCTC
GACGTCGGCGAGAATGATGTTCTGGTTATGGCTGTTGCGCACCTCGCCGAAGCTGTAGCGGTCGGCGAGATC
GGCGATGGCCTCCAGCTGTTTGTCGGTGACGTCTCCCGGCGCGGTGCCGGTGGGCTTCAGCGAGAGCGTCAC
GGCGACGTAGCCGGGCTTCTTGTGGGCGAAGGTGTTGCGTGCGCGCCAGCGGGCGAAGCCGGGGTGCTCCGC
GTCGAGCCGGGCGAGGGATTCATCGAGGTCGTCGAGGGCCTTGTAGGCCGGATCGACGAAATGCGCGGCGAC
GCGCTGGACTTCCGCCTCGGTGAGGGTGCTCGGTCCGTCCTTGAGGTTGGCCCATTCGGCCTCGACGCGCTC
GGCGAAGACTTCCGGGGTCAGCGCCTTGACCAGGATCTTGATCCGCGCCTTGTACTTGTTGTCGCGCCGGCC
ATAGCGGTTGTAGACGCGCAGGATGGCATCCAGGTAGCCGAGCAGGTGCTGCCAGGGCAGGAATTCATTGAT
GAAGCTGCCGACGATGGGGGTTCGGCCCAGGCCGCCGCCGACCGAGACGCGGAAGCCGAGCTCGCCGGCCTC
GTTCTTCACCGCCTCCAGGCCGATGTCGTGCACTTCGATGGCGGCACGGTCGCTCACCGCGCCGTTTACCGC
GATCTTGAACTTGCGCGGCAGGTGGGCGAACTCGGGGTGGAAGGTCGACCATTGGCGGATGATCTCGCACCA
GGGGCGCGGGTCCACCAGCTCGTCGCGGGCGACGCCGGCGAACTGGTCGGTGGTGGTGTTGCGGATGCAGTT
GCCGCTGGTCTGAATCGCGTGCATCTGCACGGTGGCCAGCTCGGCGAGGATTTCCGGCACGTCTTCCAGCTC
CGGCCAGTTGAACTGCACGTTCTGCCGGGTGCTGATGTGGGCGTAGCCCTTGTCGTAGTCGCGGGCGATCTG
CGCCAGCTTGCGCAGTTGGCGCGAGGAGAGCAGGCCATAGGGAACGGCGATGCGCAGCATCGGGGCATAGCG
CTGGATATAGAGACCGTTCTGCAGGCGCAGCGGGCGGAACTCCTCACCGGTCAATTCACCCGCCAGGTAACG
GCGGGTCTGGTCGCGGAACTGCTTGACGCGGTCCTCGACGATCCGTTGGTCGTACTCGTCGTATACGTACAT
GAATATTCCTGCTGTCAGGCTATGCGGCTTACTGCGTTAACCAGCGCGCACGGCTACGCGCTCCACGCGGAG
TGGGCGCACGATACCAGTTCATATTTATGCGTAAAAGTGATGTTTGAGTATATGGTAAGAACCAAAAAGACT
AAGTCGCCAGGCAAGCATAACCGCTTCGCAACGGCGCCTTTCTTGAGCGATGGGCGGCGCTGGTCTTAA

Translation:

MIRCIYALLERVDTDTAEGVDEGFFLGPAFHVDLDDLVDHVGHLLLGEGRAEDLPEAGVARRAAAEGDLVEL
RAFLVDPEDADVADMMMAAGVHAAGDVQVDVADVEQVVEVVEAALDGLGDRDRLGVGQGAEVTARAADDVGQ
QADVGGGEAQFAQFAPEGEEFALLDVGENDVLVMAVAHLAEAVAVGEIGDGLQLFVGDVSRRGAGGLQRERH
GDVAGLLVGEGVACAPAGEAGVLRVEPGEGFIEVVEGLVGRIDEMRGDALDFRLGEGARSVLEVGPFGLDAL
GEDFRGQRLDQDLDPRLVLVVAPAIAVVDAQDGIQVAEQVLPGQEFIDEAADDGGSAQAAADRDAEAELAGL
VLHRLQADVVHFDGGTVAHRAVYRDLELARQVGELGVEGRPLADDLAPGARVHQLVAGDAGELVGGGVADAV
AAGLNRVHLHGGQLGEDFRHVFQLRPVELHVLPGADVGVALVVVAGDLRQLAQLARGEQAIGNGDAQHRGIA
LDIETVLQAQRAELLTGQFTRQVTAGLVAELLDAVLDDPLVVLVVYVHEYSCCQAMRLTALTSAHGYALHAE
WAHDTSSYLCVKVMFEYMVRTKKTKSPGKHNRFATAPFLSDGRRWS*

AnnotationID:5807 GeneID:5805

AnnotatorUID: diggins

Modification Date/Time: 2005-03-01 21:09:32

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11534

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28740