ViewGene

Locus Name:
GeneID:
Location:

GeneID:5801
TrivialName: PA14_40970
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_40970
PAO1 Ortholog Locus:
Sequence Length:2025
Protein Length:674
Start: 3652621
Stop: 3654645
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGCATGCAGGTTGGTCAGGCTGTCCGGCTGGGCCACGCCGCGCTCGATCAGGTCGAGCATGTCCTTGAC
CCCGGCGAGTTCCTCGCGGATCGCCGTGGACAGCGAACGCATCACCGACTGGCCGGGGCCGGACAGGCGCTG
CGATTCCTCTTCCAGCAGGTGGTCGGTGAACGGCAGCGGCGCCAGCCCATGCAGTTCGCGGACCTCGCGCGA
ACGCGGGCCCTGGCCGTCGGACAGCGCCACCAGGTAGAGCAGTTCCTTGAGCAGATGGCGCGGCGCCTCGTA
GGCCGGGCCGATCAGCAATTGCTTGAGCTCGCGGTCGATGCGCGAGAACAGTTGCTTGCGCGACTTGCGCGG
CAACAGTTGGCCATCGACGATCGACTCGATCGCCGCGGCGCCGATCCAGCACAGCCGCGAACGGGCCACCCC
GCCGTGCAGGCTGTCGAGGCGCGCCAGCGCGCGGCCCATCAGCTTGAGGCTGGGATAGAGGTTCTGTTCGCG
GATCAGGCCGAGCAGGCCGATCTGGTACATGTGGCGCATCCGCCGGCTTTCCTCGCCCAGTTCGGCTTCGGA
AGGCAGGTGGTCGATGGCGGTGCTCGGCGGCCGCGGGATATCCAGGCGGGCGCTGAAGAAGAAGCTTTCCGG
CAGCGCCGGCTGCCCTGCggCACAGCGCACTTCGTTGATCGCCGGCAAGAGCAGCTCGGGGATCTCCTGGCG
ATTGGCCTCGACGTTCTCcaGGTAGCGGCGCAGCACGTACAGGGCGTTGCCCAGGGCTGCCAGCTGGCCGTC
GCGCTCCTCGCTGACGCCGGTGGGAATGTCGGTCGCCAGCTGCAGGGCTTCCTGGGCCAGCAGCTCGGCGCC
GGCCAGCTCGATCAGGTTGAGGGTGCCGCGGATCTGTTGCAGGCATTCGACGGCGTGCTGCAGCAGGCTGCC
GTTCTGCCGCTCGGCAATGAACTGCTCAAGACCCTGTTCGGCCTGTTCCATGGTGGCGAACAACTCGTCGCG
CACCAGACTGAGGGACGTGGCTCCTGTGACCATCGGCCTAGTGCGCCTCCCGCGCAAGAATATACAACGGCA
TCAATCAGCGAATTCCGGCTTCTGCTTGGCCATATGCGCGGCCATCGCCACCCGCAGGTCGGCGGACTGGAG
CATGGCGGCGTTCCAGGTAGCGACGTACTCGAGGCCGTCGTCGACCCGGTGGTCGCGCATATAGCGGATCAT
TTCCTTGGTACCACGGATGGCGATCGGCGACTTCGCGGCGATCTGCCGCGCCAGTTCGAAGACCCCATCCAT
CAATGCGGCCTGGTCCGCGTAGGTACGATTGACCAGGCCGATGCTCCGTGCCTCTTCGCCGTCGACCATGCG
CCCGGTGTAGGCCAGCTCGCGCATCATGCCATCGCCGATGATCCGCGGCAGGCGCTGCAGGGTGCCGACGTC
GGCGGCCATGCCGATGTCGATCTCCTTGATCGAGAACTGCGCGTCGGCGGTCGAGTAGCGCATGTCGCAGGC
CGAGACCAGGTCGATGGCGCCGCCCAGGCAGTAGCCCTGGATCGCCGCGAGCACCGGCTTGCGGCAGTTGTC
GACCGCGTTGAACGAGGCCTGCAGCTCGAGGATCTTGCGACGCAGGGCGTCGGCGTTGCGGCCGACGTCCTT
GCCCAGTTGGCTGCCGACCTGGGCCAGCAGCATCAGGTCGATCCCCGAGGAAAAATGCTTGCCCGCCCCGGA
CAGCACGACCACCCGCACTTCGTCGGTATCGTCGACCCAGCGGAAGATCTCGATGATCTCGCGCCAGAAGTC
CTGGTTCATGGCATTGATCTTGTCCGGACGGTTGATCTGGACGTGGGCGATCTTGTCTGCCAGCTCCACACG
GAATGCGTTGTACTCGGTCACGGCGATAGTCCTCGGCAGAGCAACTGCGCTGTCAGAACGCAGAGATTTTTG
TTGTGCGGAAAATCCCGCAACTATAACAAGGGCGAGCCAAATGTCGATGCTGCACTATGTGATGCACGGCAC
GCCCATTGA
Translation:
MRMQVGQAVRLGHAALDQVEHVLDPGEFLADRRGQRTHHRLAGAGQALRFLFQQVVGERQRRQPMQFADLAR
TRALAVGQRHQVEQFLEQMARRLVGRADQQLLELAVDAREQLLARLARQQLAIDDRLDRRGADPAQPRTGHP
AVQAVEARQRAAHQLEAGIEVLFADQAEQADLVHVAHPPAFLAQFGFGRQVVDGGARRPRDIQAGAEEEAFR
QRRLPCGTAHFVDRRQEQLGDLLAIGLDVLQVAAQHVQGVAQGCQLAVALLADAGGNVGRQLQGFLGQQLGA
GQLDQVEGAADLLQAFDGVLQQAAVLPLGNELLKTLFGLFHGGEQLVAHQTEGRGSCDHRPSAPPAQEYTTA
SISEFRLLLGHMRGHRHPQVGGLEHGGVPGSDVLEAVVDPVVAHIADHFLGTTDGDRRLRGDLPRQFEDPIH
QCGLVRVGTIDQADAPCLFAVDHAPGVGQLAHHAIADDPRQALQGADVGGHADVDLLDRELRVGGRVAHVAG
RDQVDGAAQAVALDRREHRLAAVVDRVERGLQLEDLATQGVGVAADVLAQLAADLGQQHQVDPRGKMLARPG
QHDHPHFVGIVDPAEDLDDLAPEVLVHGIDLVRTVDLDVGDLVCQLHTECVVLGHGDSPRQSNCAVRTQRFL
LCGKSRNYNKGEPNVDAALCDARHAH*
AnnotationID:5803GeneID:5801
AnnotatorUID: diggins
Modification Date/Time: 2005-03-01 19:07:27
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15681
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28732
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48803How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1301289Stop: 1299265
Length: 2025
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGCATGCAGGTTGGTCAGGCTGTCCGGCTGGGCCACGCCGCGCTCGATCAGGTCGAGCATGTCCTTGAC
CCCGGCGAGTTCCTCGCGGATCGCCGTGGACAGCGAACGCATCACCGACTGGCCGGGGCCGGACAGGCGCTG
CGATTCCTCTTCCAGCAGGTGGTCGGTGAACGGCAGCGGCGCCAGCCCATGCAGTTCGCGGACCTCGCGCGA
ACGCGGGCCCTGGCCGTCGGACAGCGCCACCAGGTAGAGCAGTTCCTTGAGCAGATGGCGCGGCGCCTCGTA
GGCCGGGCCGATCAGCAATTGCTTGAGCTCGCGGTCGATGCGCGAGAACAGTTGCTTGCGCGACTTGCGCGG
CAACAGTTGGCCATCGACGATCGACTCGATCGCCGCGGCGCCGATCCAGCACAGCCGCGAACGGGCCACCCC
GCCGTGCAGGCTGTCGAGGCGCGCCAGCGCGCGGCCCATCAGCTTGAGGCTGGGATAGAGGTTCTGTTCGCG
GATCAGGCCGAGCAGGCCGATCTGGTACATGTGGCGCATCCGCCGGCTTTCCTCGCCCAGTTCGGCTTCGGA
AGGCAGGTGGTCGATGGCGGTGCTCGGCGGCCGCGGGATATCCAGGCGGGCGCTGAAGAAGAAGCTTTCCGG
CAGCGCCGGCTGCCCTGCggCACAGCGCACTTCGTTGATCGCCGGCAAGAGCAGCTCGGGGATCTCCTGGCG
ATTGGCCTCGACGTTCTCcaGGTAGCGGCGCAGCACGTACAGGGCGTTGCCCAGGGCTGCCAGCTGGCCGTC
GCGCTCCTCGCTGACGCCGGTGGGAATGTCGGTCGCCAGCTGCAGGGCTTCCTGGGCCAGCAGCTCGGCGCC
GGCCAGCTCGATCAGGTTGAGGGTGCCGCGGATCTGTTGCAGGCATTCGACGGCGTGCTGCAGCAGGCTGCC
GTTCTGCCGCTCGGCAATGAACTGCTCAAGACCCTGTTCGGCCTGTTCCATGGTGGCGAACAACTCGTCGCG
CACCAGACTGAGGGACGTGGCTCCTGTGACCATCGGCCTAGTGCGCCTCCCGCGCAAGAATATACAACGGCA
TCAATCAGCGAATTCCGGCTTCTGCTTGGCCATATGCGCGGCCATCGCCACCCGCAGGTCGGCGGACTGGAG
CATGGCGGCGTTCCAGGTAGCGACGTACTCGAGGCCGTCGTCGACCCGGTGGTCGCGCATATAGCGGATCAT
TTCCTTGGTACCACGGATGGCGATCGGCGACTTCGCGGCGATCTGCCGCGCCAGTTCGAAGACCCCATCCAT
CAATGCGGCCTGGTCCGCGTAGGTACGATTGACCAGGCCGATGCTCCGTGCCTCTTCGCCGTCGACCATGCG
CCCGGTGTAGGCCAGCTCGCGCATCATGCCATCGCCGATGATCCGCGGCAGGCGCTGCAGGGTGCCGACGTC
GGCGGCCATGCCGATGTCGATCTCCTTGATCGAGAACTGCGCGTCGGCGGTCGAGTAGCGCATGTCGCAGGC
CGAGACCAGGTCGATGGCGCCGCCCAGGCAGTAGCCCTGGATCGCCGCGAGCACCGGCTTGCGGCAGTTGTC
GACCGCGTTGAACGAGGCCTGCAGCTCGAGGATCTTGCGACGCAGGGCGTCGGCGTTGCGGCCGACGTCCTT
GCCCAGTTGGCTGCCGACCTGGGCCAGCAGCATCAGGTCGATCCCCGAGGAAAAATGCTTGCCCGCCCCGGA
CAGCACGACCACCCGCACTTCGTCGGTATCGTCGACCCAGCGGAAGATCTCGATGATCTCGCGCCAGAAGTC
CTGGTTCATGGCATTGATCTTGTCCGGACGGTTGATCTGGACGTGGGCGATCTTGTCTGCCAGCTCCACACG
GAATGCGTTGTACTCGGTCACGGCGATAGTCCTCGGCAGAGCAACTGCGCTGTCAGAACGCAGAGATTTTTG
TTGTGCGGAAAATCCCGCAACTATAACAAGGGCGAGCCAAATGTCGATGCTGCACTATGTGATGCACGGCAC
GCCCATTGA