ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5795

TrivialName: PA14_41180

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_41180

PAO1 Ortholog Locus:

Sequence Length: 2127

Protein Length: 708

Start: 3673342

Stop: 3675468

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAF10482.1|AE001943_2 (AE001943) conserved hypothetical protein [Deinococcus radiodurans] Identities = 170/648 (26%), Positives = 247/648 (38%), Gaps = 167/648 (25%)

Sequence:

ATGCCGGCGCCTTCCTCTGTTCAGACCTGGCCAGCGGTATCAGTGGCGAGATCCTCTACGTCgatggcGGCT
TCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCG
GCCTTTTTCATGGGCGGAATAAAGAAAAggccgngtaaacggccTTTttcttgcaTCTCGGTCTCAGTATTT
CTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAG
GAAGCGGCGGTACATGGCCttcTCGTCGTCGGAGATAGccTcctccGGCTCGCTGACGCCATTCAGGCGGAT
CACCACGTAATCGCCATTGGCCAGGGTCACGCCAGAGAGCGAAGGCTTGTCCTTGGCCTCCGGACGCTGCAT
GCGGAACACCGCCTGGAGCAGTTTCGGATCGACGCCTTCCTGGCCGCGGGAGGCCGCCTCGACCACTTTCCA
CGACTCCCCCGCTGCGGAAGAGGTACGGCCTTCACGCAGCTCTGCGATCAGGGCCTCGCCACGCTTCTGCGC
CTcCTCGGCGGCCTTTTCGGCAGCCAGGCGCTCGCGGATGTTCGCCGCGACCTGCTCCAGCGGTTGCTCCTT
CGGCTTGTTGTGCTCCTTGACCCGCAGTACCACCACGGTGTCCGGATCCAGCTCGATGGCGCCACTGTTGGC
CGCTTCTTCCAGCACCTCGGGGCTGAACGCGGTCTGCACGATCTGGCGGTTGGCAGCGATGCCGTCGCCCCC
CGAACGTCCGAACGGCTGGCTGGTCTGGACCTTCAGGCCcAtTTCCtgCGCCGGCTGGCTCAGGTCGGCGGC
TTcgTAGGCGGAgCtTTCCAAGTCCTTGGTAGCCTCGACGAAGCGCTGCTCGACCATCTGTTTCTTCAGTTC
GTCCTCGAGCTTCGGCTTGAGGCTTTCCAGGCTCGGTACTTCCGGCGCCTGCACGCCCAGCAGCTTGATCAG
GTGGTAGCCGTACGGAGTCTTCACCGGGGCGGATACCTCACCTTGCTTCAGCGCATACAGCGCCTCCTCGAA
CGCGGGGTCGTACACGCCGCGGCCGGCGTAGCCCAGGTCGCCGCCGGTGGCGGCCGAGCCGATATCCTGGGA
GAACTCCTTGGCCAGCGCGGCGAAATCCTCGCCCTTGGCCAGGCGAGCCTTGATCTCGTCGATCTTCGCCTT
GGCCTGCTCGTCGCCGACCTTGTCGTTCACCTCGATCAGGATGTGGGCGGCATCGCGCTGCTCGGAGAGGTT
GGCGATTTCCTTCTGGTACAACGCCTCGAGGTCTTCCTGCTTCACCTTGACCTGGTCGAAGAAGGAGGACTT
CTTCAGTTCCACGTATTCGACGACCACCTGCTCGGGAGTCATGAACTCGCTCTTGTGGCCTTCGTAGAAGGC
CTTCACCTCGTCCTCGCTCACGCTGCTCTTGGACGCGTCGGCCTTGATCGCCAGGGTGGCGAAGTCGCGGGT
CTGCTTCTCGAGGCGAGCGAAGGACTGCAATTCGTTGTCGGTGACGAAACCGGTGCCCGCCAGGCCGGCGCG
AAGCTGGCCGATGAGCATTTCCTGGCCGAGCATCTGGCGGAACTGCATGCGGCTGTAGTTCATCTGGCGGAT
GACCTGGTCGAAGCGATCCGCGTTGAACTTGCCGTCGACCTGGAACTCGGGAGTTTGCAGGATCAACTGGTC
CAGCGCCTGGTCGGAGAAGGCGAACTTGTCGTCCTTGGCGGCCTGGAGCAGCAGGGTACGCTCGATCAGCCC
CTTCAGGGCCGCTTCCTTGAGCAGCTTGTCATCCAGCATGGATGGATCGAAATCCTTGCCCAGGCGTTGCAG
CAGCTGGCGACGCTGCATGTCCACGGCCTGTTGGACTTCATTGAGACTGATATCGTCGCCGTTGACCTTGGC
GGCCACGTTGGAGTGGTCGGTGGCCCGGATGATCGCGTCGAAGCCGGTCAGCGACAGGAGAACGATGATCAC
GCCAATGATGGTCTTGGCGATCCAGCCCTGGGAATTATCCCTGATGTTCTGCAGCATGCAGCCCCCAAAAAC
TGCCACGACCAGCCGTCTTGGGCGGCGCGGCGTGGGTAA

Translation:

MPAPSSVQTWPAVSVARSSTSMAASTLPPWARWTTTDHPAHEKWPLRAAFFMGGIKKRPXKRPFSCISVSVF
LDFRLVLQLTAEGGEVCLSAARSQEAAVHGLLVVGDSLLRLADAIQADHHVIAIGQGHARERRLVLGLRTLH
AEHRLEQFRIDAFLAAGGRLDHFPRLPRCGRGTAFTQLCDQGLATLLRLLGGLFGSQALADVRRDLLQRLLL
RLVVLLDPQYHHGVRIQLDGATVGRFFQHLGAERGLHDLAVGSDAVAPRTSERLAGLDLQAHFLRRLAQVGG
FVGGAFQVLGSLDEALLDHLFLQFVLELRLEAFQARYFRRLHAQQLDQVVAVRSLHRGGYLTLLQRIQRLLE
RGVVHAAAGVAQVAAGGGRADILGELLGQRGEILALGQASLDLVDLRLGLLVADLVVHLDQDVGGIALLGEV
GDFLLVQRLEVFLLHLDLVEEGGLLQFHVFDDHLLGSHELALVAFVEGLHLVLAHAALGRVGLDRQGGEVAG
LLLEASEGLQFVVGDETGARQAGAKLADEHFLAEHLAELHAAVVHLADDLVEAIRVELAVDLELGSLQDQLV
QRLVGEGELVVLGGLEQQGTLDQPLQGRFLEQLVIQHGWIEILAQALQQLATLHVHGLLDFIETDIVAVDLG
GHVGVVGGPDDRVEAGQRQENDDHANDGLGDPALGIIPDVLQHAAPKNCHDQPSWAARRG*

AnnotationID:5797 GeneID:5795

AnnotatorUID: diggins

Modification Date/Time: 2005-03-01 17:05:06

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11516

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28720