ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5788

TrivialName: PA14_41550

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_41550

PAO1 Ortholog Locus:

Sequence Length: 2460

Protein Length: 819

Start: 3711176

Stop: 3708717

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE32808.1| (BX640444) adhesin [Bordetella bronchiseptica] Identities = 110/459 (23%), Positives = 169/459 (36%), Gaps = 63/459 (13%)

Sequence:

ATGGTGTGCGGCGCTGACCAGCAGGGCGGGGCGCTCGCGTCCGGCGAGACTGAAGCTGGCGTGGTCGAAGAC
TTCGCACAGCGCACGGAGGGCCTCGAAACGCGCCTGGATATCGGTTTCCACCAGCGCGAACAGGCGCCAGGG
CAGTTCGACGGATTCGACCTGAACCCCGGCGTGCTTGAGTTCGGGTTGTTTCGACAGGGGGTCGAACGCCGG
CAGGGTCAGGACATTGCAGCCCAGGCCCTTGAGGAAGCGATCGCCCCAGTGCATCGGCAGGAAGGCCTGGCC
GGGGCGCACCGAGTCGTCTGCACTCACTGGCAGGATCAGGGCGCCACGCCGGCTCTTCAGGCGCACGAGCTG
CCCGTCCCGCAGTTGGCGGCGGCGCAGTTCCTCGGGATGCAGGTGCACCAGGGCCTCCTCTTCATGGCCGAA
CAGGCGTGCGCAGGTGCCGGTCCGGCTCATGCCGTGCCACTGGTCGCGCAAGCGTCCGGTATTGAGGGTCAG
CGGGTAGCGCGCGTCACGTTTTTCCTGGGCGGCGCGGTAGGGTTCGGCGACCAGTTGCGCGCGTCCCGAGGC
GGTAGGGAAGCGGCCGTCTGCATAGAGCCGTGCGGTGCCGTGCTCCGCGCCACTGGGAAATGGCCATTGCTG
CGGCCCCAGGCGGTCGAGCAGTGCGTAGCTGAGGCCGGAAAGATCGAGGTCGCGGCCGGCGGTAAGCAGCTT
GTATTCGTCGAACAGGCTGCGGCTGTCGGCAAAGGCGAACAGGCCGGGTTTAGCGGGTCGCAGGTGCCCTTC
CAGGCGGCGCGCGAAGTCGCAGACGATGTTCCAGTCCTGGCGTGCTTCCCCGGGGGGCGGAACGGCCCGACG
GACATGACTGACCCGCCGTTCCGAATTGGTCACGGAGCCTTCCTTTTCTCCCCAGGATGCGGCTGGAAGCAA
AAGGTCGGCGTATTGGCAGGTTTCCGTGCCGGCGAAGGCTTCCTGGACCACCACGAAGGGACAGCGGGCAAG
GGCCTCGTGGATCTTGCGCTGGTCCGGCAGCGATTGCGCGGGGTTGGTACAGGCGATCCAGAGCGCCTTGAT
CCGGCCGTCGTGGACCGCATCGAACAGCTCGATGGCGCTGAGACCGGGGGACGTGGGCAACTGTTCCACACC
CCAGTAGTGCGCCACCTCGGCGCGATGGCCGGGATCGGCGGCTTCGCGGTGGCCGGGCAGCAGGGTGGCCAG
GCTGCCGGTCTCGCGACCGCCCATGGCGTTCGGCTGGCCGGTGAGGGAAAACGGTCCGCATCCGGCGCGGCC
GATCTTGCCGGTGGCCAGGTGCAGGTTGATCAGTGCGCTGTTCTTGGCGCTGCCGGCGCTGGACTGGTTGAG
CCCCATGCACCAGAGCGAAAGGAAGCGCGGCGAACGGCCGATCCATTCAGCGCAGCGCTGCAGGTCGGCGCG
GTCGATGCCGCAGATGTCGGCGACGGCGGCCGGGGTGTAGTCGCGCACCAGTTCCTTCAGGTCGGCGAAACC
CTCGGTATGCTCGGCGATGAACGAACGGTCGATCCAGTCCTCCCAGAGCAGGATATGCAGGATGCCGTGGAA
CAGTGCGACGTCGGTACCGGGCAGCAGCGCCAGGTGCAGGTCGGCCAGCTCGCAGGTGTCGGTGCGCCGCGG
GTCGATCACCACGATGCGCATCTCCGGCCGAGCGGCCTTGGCGGCTTCCAGGCGACGGAACAGGACCGGGTG
GGCGAAGGCCATGTTGCTGCCGGCGATCAGCACGCAATCGGCGCAGTCGAGGTCTTCGTAGCTGCACGGCGG
TGCGTCGGCGCCCAGGCTGCGCTTGTAGCCGACCACCGCCGAGGACATGCACAGGCGCGAATTGCTGTCGAT
GTTGTTGGTGCCGACCAGGGCCCGCGCCAGCTTGTTGAAGGCGTAGTAGTCCTCGGTCAGCAACTGGCCGGA
GATATAGAAGGCCACGCTGTCCGGCCCGTGTTCGCGAATGGTCTCGGCGAAACGCCCGGCGGCATGTTCCAG
GGCACTCTCCCAGTCGCTGCGAGCCCGCGCCAGTTGCTTGCCGAGGCGCAGTTGGGGGTACAGCGCGCGGGC
CTGGAGGTCGCCGGTCAGGTGCAGGCTGGCGCCTTTGCTGCAGAGTCTGCCGAAGTTGGCCGGGTGCCGCGG
ATCGCCTTGCACGCCGAGGATGCGTTCGCCGTCGTGTTCGATCAGGACGCCACAACCCACGCCGCAGTAGCA
GCAGGTCGAAGCGGTGGTGCGCAGCGGGGAATCTGTCGACATGCTCGGCTCCTGTTATCGGCGAGAGATCAG
GCGCACAGCGCCACGCTGTCCAGGCCGAGCAGCACCCGTCCGTTCTCCACCCGCACCGGGTGGCGATGGGCG
CAGCCCTGGTCCGGGGCCACGGCTTCGCCGCTCTCCAGTTCGATCTGCCAGTTGTGCAACGGACAGGCCACT
CGCTTGCCGTAG

Translation:

MVCGADQQGGALASGETEAGVVEDFAQRTEGLETRLDIGFHQREQAPGQFDGFDLNPGVLEFGLFRQGVERR
QGQDIAAQALEEAIAPVHRQEGLAGAHRVVCTHWQDQGATPALQAHELPVPQLAAAQFLGMQVHQGLLFMAE
QACAGAGPAHAVPLVAQASGIEGQRVARVTFFLGGAVGFGDQLRASRGGREAAVCIEPCGAVLRATGKWPLL
RPQAVEQCVAEAGKIEVAAGGKQLVFVEQAAAVGKGEQAGFSGSQVPFQAAREVADDVPVLACFPGGRNGPT
DMTDPPFRIGHGAFLFSPGCGWKQKVGVLAGFRAGEGFLDHHEGTAGKGLVDLALVRQRLRGVGTGDPERLD
PAVVDRIEQLDGAETGGRGQLFHTPVVRHLGAMAGIGGFAVAGQQGGQAAGLATAHGVRLAGEGKRSASGAA
DLAGGQVQVDQCAVLGAAGAGLVEPHAPERKEARRTADPFSAALQVGAVDAADVGDGGRGVVAHQFLQVGET
LGMLGDERTVDPVLPEQDMQDAVEQCDVGTGQQRQVQVGQLAGVGAPRVDHHDAHLRPSGLGGFQATEQDRV
GEGHVAAGDQHAIGAVEVFVAARRCVGAQAALVADHRRGHAQARIAVDVVGADQGPRQLVEGVVVLGQQLAG
DIEGHAVRPVFANGLGETPGGMFQGTLPVAASPRQLLAEAQLGVQRAGLEVAGQVQAGAFAAESAEVGRVPR
IALHAEDAFAVVFDQDATTHAAVAAGRSGGAQRGICRHARLLLSARDQAHSATLSRPSSTRPFSTRTGWRWA
QPWSGATASPLSSSICQLCNGQATRLP*

AnnotationID:5790 GeneID:5788

AnnotatorUID: diggins

Modification Date/Time: 2005-03-01 10:10:22

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11506

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28707