ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5780

TrivialName: PA14_41770

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_41770

PAO1 Ortholog Locus:

Sequence Length: 1608

Protein Length: 535

Start: 3728857

Stop: 3730464

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA17579.1| (AL021999) PE_PGRS [Mycobacterium tuberculosis H37Rv] Identities = 40/111 (36%), Positives = 45/111 (40%), Gaps = 11/111 (9%)

Sequence:

GTGTACCCCCTGATTCTCATGGCGCTATCCCCAGAGATTGTTCTTGTTTTTGGGTATCTGCTACTTGGTGCG
CAGGTGTATGACGTCGCCACCAGTGCCCAGCTCACGGACCTGGTTTTCAGTGATCTTGTTGATCTGCGGAAA
CTCGCGGAACGCCAGCAGGCTGACGGTGCGGTCGTCCACCAGGCGCATGTCGCGATCGTTCAGCGCCAGCGC
GTTGCGGGGCTCCTGCCCACTCGGGAAGATCACGAACAGGACGTTCTGGTCCCAGATTTCCTCGAAGCGCGT
CCGGGTGAAGCTGATGTTGCCCAAGGCCGGATCGGCGACGAAGACGTGATCGTTGTAGACATCGCGCACCAC
CACGAAATGCTTGAAGCCGGCATAGTGGATGGGGACCAGCGCCGGATGCTCGAGAGCGTCCAGGTCGCTGAA
CTCGGCGCGAAAACCACCGCTCTTGTAGCCCAGCGCAGCGGCGTAGCGCTTCATGTCGAGCAGCGAGAAACC
GCGGCGCTGCACGATCTTATCGGCCTCGCCATAGCGCAGCAGCCCTTCCATGACCTGGCGTTCCTCGAGGTT
GCGCCCGAGGTAGTAGTCCAGCAGCGTGGTAAGCGCCGCCGAGCCGCAGCTGTAGTCATAGGCCTGGCGGAT
GACGTTGCGGAACTGCAACTGGCTCATCGGCTCCAGTTGCACCGATTCGCGGTAGGGTCCATTGGGGGTCAG
AGGCTGGCTGAGGTTGACCGTGCCCTGCGGTTGCGGCTTGGTATCGACCGTCTGGGTGAACCCGAACAGTCC
GATCAGACTTCCCAGCAAAATCTCGAACATCGCCCCGTCGTACCTCTTTCGGAGAAAGACCCCGCCGATGCC
TCGGCGAGGTCTTCGCGTCTCGACTCGGTTCCTGGATCAGTGACCCCAGACCTTGATGGTGGAACCGGCCAT
GTTCAGCCCGGAGACGGTCAGCGAGCCGATGCTGGCGGCGCTGGTGTCGCCCACCTTGATGGCGCCAACGGT
CACGTCGCCGGTGATGGCCGGCAGGCCGATGGCCAATTGCTGGGTCGACTTGCCGCCGATATCGGTGGTGAC
GACGTCGATGGTCAGCGGCTTGGTATCGTCGATGGTCAGCGCCGGCAGGCTGATGTTCTCCAGCCGCAGGGA
GCCGCCGTTGGTGTCGGTATCGGTGTAGGTCACGGCCCCGACGGAGCCCTGGAAAGTACCGGAAATGCTGAT
GCCTGCCTGGCCGGTCACGTCGGACAGCGCGCCATCGTCCATGGCTTTCAGGTCGGCATGCGCCAGCAAGGG
AGCAGCCAGAACAGCAGTTGCAAGGAACAGGTGCTTTTTCATTGTTATTTCTCCAGTGTTCAGGTGTGGTTT
GCCCCAGGGCACTGCCGTTTGCATCCTGTCCCCGGCAGATCGACCGGCATCTCGCCGGTCTCCAGGTCCGGT
ACTGCTTCCCTAGGTGTCCCGGACATGGATTCGGTAGAGCCTCATGCTCTCTCGTCCTGGATTCCAAGCTAC
TGGGCCACCCCTTCCGCCGCCAGCCCATCCAAGGGATGGAGCGATGGCGGCTGCCGCTCACGCCTCGCTCAG
CAGTCCCAGGCTTTTACCCTTTAG

Translation:

MYPLILMALSPEIVLVFGYLLLGAQVYDVATSAQLTDLVFSDLVDLRKLAERQQADGAVVHQAHVAIVQRQR
VAGLLPTREDHEQDVLVPDFLEARPGEADVAQGRIGDEDVIVVDIAHHHEMLEAGIVDGDQRRMLESVQVAE
LGAKTTALVAQRSGVALHVEQRETAALHDLIGLAIAQQPFHDLAFLEVAPEVVVQQRGKRRRAAAVVIGLAD
DVAELQLAHRLQLHRFAVGSIGGQRLAEVDRALRLRLGIDRLGEPEQSDQTSQQNLEHRPVVPLSEKDPADA
SARSSRLDSVPGSVTPDLDGGTGHVQPGDGQRADAGGAGVAHLDGANGHVAGDGRQADGQLLGRLAADIGGD
DVDGQRLGIVDGQRRQADVLQPQGAAVGVGIGVGHGPDGALESTGNADACLAGHVGQRAIVHGFQVGMRQQG
SSQNSSCKEQVLFHCYFSSVQVWFAPGHCRLHPVPGRSTGISPVSRSGTASLGVPDMDSVEPHALSSWIPSY
WATPSAASPSKGWSDGGCRSRLAQQSQAFTL*

AnnotationID:5782 GeneID:5780

AnnotatorUID: diggins

Modification Date/Time: 2005-03-01 07:07:16

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15662

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28691