ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5776

TrivialName: PA14_42040

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_42040

PAO1 Ortholog Locus:

Sequence Length: 1260

Protein Length: 419

Start: 3749812

Stop: 3751071

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE07544.1| (BX569691) possible tRNA/rRNA methyltransferase [Synechococcus sp. WH 8102] Identities = 34/93 (36%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Sequence:

ATGCGCCCGCTGGTGACCAGGCCGACGTACAGCGTTCCATCGGCGGCATGGGCGATGCCGTTGGGATACCGG
GCCCCCGCTGGCAGAACGATGCTCGTCGCGGCGCAGGACGGTTCGCGCTCGCCCGGCGCACGGGCGAAAACC
GGCAAGACGGTCGCCGATACCATGGATACCAGCAGCAACACGGAAGCCTGTCGTCTCATCATGCTTTCTCCG
TCGATGTGCGCCCTACCAGCGCGGGGTCCGGGCGCGCACCGTGAGCGGCGCCTCCAGCGTGGCGCACTCCTC
TTCGGCGAGGTCCAGCGTCAGCGCCGCGAGGGCATCCTCGAGGTGATGCGGCCTGGACAGGCCGACGATCGG
CGCGGCGACACCGTTCCGGCCAAGCAGCCAGGCCAGGGCGAGTTGCGCCGGTGGAAGCCCGCGGGCTGCGGC
GAGTTTCTCCAACGCGCCGAGGGTCGACTCGACTTCCTCCCTGCCGCCGTACCAGCGCGGGGCCTGTTCGTC
CGTCCGGGTCCGCAGCGTGCCGGCGCTTCGCGCTCCGGCCAGCAGCCCACGCGCCAGCGGCGACCAGGGCGT
CAACGCGATCCCCTCTTCCCGGCACAGCGGCATGAGGTCCTCCTCGTCCTCGCGAACGATCAGGTTGTACTG
GCTCTGCATCGAGATGAATTGCGCCAGGCCGTGGTGGCGCTGGAAGGCGAGCATCTTCATGAAGCGCCAGGC
CGGCATCGACGAGGCGCCGAGGTAACGGACCTTGCCGACACGCACCAGGCTGTCGAGGGTTTCGCAGGTTTC
CGCGATCGGGGTGTCCGGATCGAAGCGATGGATCACGAAGAGATCCAGGTAGTCCGTACCCAACCGCCGCAG
CGAGGCATCCACGCTGGCAAGCAGGTGCTTACGCGACAAGCCGCAGGCGTTGGGCCTGTCGCTCATGGGAAA
GAACGCCTTGGTGGCGATTACCAGGTCCTCGCGCTGCGCGAAGTCCCTGAGCGCGCGCCCGAGGATCCGCTC
GCTCTCGCCGGTGGAATAGATATCGGCACTGTCGAAGAAGTCGATCCCGGCTTCCAGCGCCTCGCGAATGAA
CGGACGCGCCCGTTCCTCGTCCAGCACCCACGGACGCCACGCCGGATCGCCATAGGTCATGCACCCCAGGCA
GAGCCGGGAGACTTTCAGGCCGCTATTGCCAAGACGGACATGCTGCATCGTACGACCTCGTCGGAAGGCTCT
GAAAAGAGCGGTTTCCCCGGTCCAGCCTGTTCATGA

Translation:

MRPLVTRPTYSVPSAAWAMPLGYRAPAGRTMLVAAQDGSRSPGARAKTGKTVADTMDTSSNTEACRLIMLSP
SMCALPARGPGAHRERRLQRGALLFGEVQRQRREGILEVMRPGQADDRRGDTVPAKQPGQGELRRWKPAGCG
EFLQRAEGRLDFLPAAVPARGLFVRPGPQRAGASRSGQQPTRQRRPGRQRDPLFPAQRHEVLLVLANDQVVL
ALHRDELRQAVVALEGEHLHEAPGRHRRGAEVTDLADTHQAVEGFAGFRDRGVRIEAMDHEEIQVVRTQPPQ
RGIHAGKQVLTRQAAGVGPVAHGKERLGGDYQVLALREVPERAPEDPLALAGGIDIGTVEEVDPGFQRLANE
RTRPFLVQHPRTPRRIAIGHAPQAEPGDFQAAIAKTDMLHRTTSSEGSEKSGFPGPACS*

AnnotationID:5778 GeneID:5776

AnnotatorUID: diggins

Modification Date/Time: 2005-02-28 09:09:25

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11485

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28683