ViewGene

Locus Name:
GeneID:
Location:

GeneID:5775
TrivialName: PA14_42070
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_42070
PAO1 Ortholog Locus:
Sequence Length:2307
Protein Length:768
Start: 3752329
Stop: 3754635
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGCGCTATTCGCCCTACCCGTGGCGGCCTGGCTGGCAAGAACCAGGGGATACCGGGGTGGCGTCATCCGC
CGCGGTACGCGACCACGAGAAAGCCGGCCCGAAGGCCGGCTCTCCATGCGACGTCAGGACTCAGAACAGCTC
GCCCTTCGCCGCCTTCTCCAGCAACAGCGCCGGCGGCTCGAAGCGCTCGCCGTACTGTTCGACCAGGTATTG
GGCGCGGGCGATGAAGTCCTTCAGGCCGTACTGGTTGATGAACTGCAAGGCGCCCCCGCTCCAGGCGGCGAA
ACCGATACCGAAGATCGAGCCGATGTTCGCGTCGGCGGTGGAGTGCAATACCCCCTCCTCCACGCAACGAAC
GGTCTCGATGGCCTGGATGAACAGCAGGCGGTCGCGTACGTCCTCGGCGGATATTTGCGCATCGGGCTTCTC
GAAGCGGCTCTTGAGTTCCGCCCAGAGATGTTTCCTGCCGTTCGCCGGGTAGTCGTAGAAGCCGGCGCCGGC
CGCCTTGCCCGGGCGCTTGTACTCATTGACCATCAGGTCGATCACGGCGAACGCGGGGTGCGTCGGCAGaGC
CTTGCCCTCGGCCTCGAGGTCGCGGGCGGTCTGGTTGCGGATGTGGGTCATCAGGCTCAGCGAGACTTCGTC
GGAAATCGCCAGCGGCCCCACCGGCATACCGGCCTGGCGCGCCTGGTTGTCGATCATCGCGGCGCTCACGCC
TTCGCCGAGCATGGCGATGCCTTCGTTGGTGAAGGTGCCGAATACCCGCGAGGTGAAGAAGCCGCGGCTGTC
GTTGACCACGATCGGCGTTTTCTTGATCTGCAGCACGTAGTCGAAACCGCGTGCCAGGGTTTCGTCGCTGGT
CTTTTCGCCGCGGATGATCTCCACCAGCGGCATCTTGTCCACCGGGCTGAAGAAGTGCAGGCCGATGAACTT
CTCCGGCCGCGCCACCGCCTGGGCCAGCCCGGTGATCGGCAGGGTCGAGGTATTGGACGCCACCACCGCATC
GGCCAGGGCATGCTTCTCGGCCTCGGCGGTGACCTTGCCTTTCAGCGCGCGGTCCTCGAAGACCGCCTCGAT
GATCAGGTCGCAGCCTTCGAAATCGGCTTCGCTGACGCTCGGCACGATCCGCGCGAGGAAGGCGTCGCGCTT
CTCGGCGGACAGGTGCCCGCGCGCAACTTTCTTGTCCAGCAGCCTGGCCGAATAGGCCTTGCCCTTCTCCGC
CGCTTCCAGCGAGACGTCCTTGAGCACCACCTCGATGCCGGCCGCCGCCGATACGTAGGCGATGCCCGCGCC
CATCATCCCGGCGCCGAGCACGCCGACCTTTTTCGTCGCCCGCACCGGATACCCCTGCGGCCGCGACTTGCC
GGCGTTGATCTCGTTGAGCTGGAACCAGAAGGTGCCGATCATGTTCTTCGCCACCTGGCCGGTGGTCAGCTC
GGTGAAATAGCGCGCCTCGATCAGTTGCGCGGTGTCGAAATCGACCTGGGCGCCCTCCACCGCCGCGCACAT
GATCTTCTCGGGCGCCGGGAAGCAACCCTTGGTCTTGTCGCGCAGCACCGACGGTGCGATGGCCAGCATCTG
CGCCACGTTGGGACTGGCAGGCGTACCGCCGGGAATCTTGTAGCCGGCGCTGTCCCAGGGCTGCTTCGCCGC
CGGGTTGGCGAGGATCCAGGCGCGGGCCTTCTCCAGCATTTCCTCGGGGCTGTCGGCCAGTTCGTGGATCAG
CCCGGCCTTGAGCGCTTCCGCCGGACGCACCTTCTTGCCTTCGGCGAGGTACGGCAGGGCTTTCTCCAGACC
AAGCAGGCGCACCATACGTACCACCCCGCCGCCGCCCGGCAACAGGCCGAGAGTCACCTCCGGCAGGCCGAG
CTGCACGCCGGGATTGTCCAGGGCGATGCGGTGGTGGCAGGCCAGGCAGATCTCCCAGCCGCCGCCCAGCGC
AGCGCCGTTGATCGCGGCGACCACCGGCTTGCCGAGGGTCTCCAGGCGCCGCAGTTGGCCCTTGAGTTCGAG
GATGCCCTGGTAGAAGGCCGGGGCGTCGGCCTTGGTGACCTTGATCAGCTCGTTGAGATCGCCGCCGGCGAA
GAAGGTCTTCTTCGCCGAGGTCAGCACCACGCCGGCGATCCCCTCTTTCTCCGCCTCCAGCCGCGCGATGGT
CTTCGCCATCGCCTCGCGGTAGACACCGTTCATGGTGTTGGCGCTCTGCCCGGGCATGTCCATGGTCAGGAC
GACGACGTTGTCCTGGCCTTTTTCGTAACGGATAGCGTCAGTCATTCCGGTTCTCCCTTCACACGCGCTCGA
TGA
Translation:
MALFALPVAAWLARTRGYRGGVIRRGTRPRESRPEGRLSMRRQDSEQLALRRLLQQQRRRLEALAVLFDQVL
GAGDEVLQAVLVDELQGAPAPGGETDTEDRADVRVGGGVQYPLLHATNGLDGLDEQQAVAYVLGGYLRIGLL
EAALEFRPEMFPAVRRVVVEAGAGRLARALVLIDHQVDHGERGVRRQSLALGLEVAGGLVADVGHQAQRDFV
GNRQRPHRHTGLARLVVDHRGAHAFAEHGDAFVGEGAEYPRGEEAAAVVDHDRRFLDLQHVVETACQGFVAG
LFAADDLHQRHLVHRAEEVQADELLRPRHRLGQPGDRQGRGIGRHHRIGQGMLLGLGGDLAFQRAVLEDRLD
DQVAAFEIGFADARHDPREEGVALLGGQVPARNFLVQQPGRIGLALLRRFQRDVLEHHLDAGRRRYVGDARA
HHPGAEHADLFRRPHRIPLRPRLAGVDLVELEPEGADHVLRHLAGGQLGEIARLDQLRGVEIDLGALHRRAH
DLLGRREATLGLVAQHRRCDGQHLRHVGTGRRTAGNLVAGAVPGLLRRRVGEDPGAGLLQHFLGAVGQFVDQ
PGLERFRRTHLLAFGEVRQGFLQTKQAHHTYHPAAARQQAESHLRQAELHAGIVQGDAVVAGQADLPAAAQR
SAVDRGDHRLAEGLQAPQLALEFEDALVEGRGVGLGDLDQLVEIAAGEEGLLRRGQHHAGDPLFLRLQPRDG
LRHRLAVDTVHGVGALPGHVHGQDDDVVLAFFVTDSVSHSGSPFTRAR*
AnnotationID:5777GeneID:5775
AnnotatorUID: diggins
Modification Date/Time: 2005-02-28 08:08:20
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:11483
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28681
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48777How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1201580Stop: 1199274
Length: 2307
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCGCTATTCGCCCTACCCGTGGCGGCCTGGCTGGCAAGAACCAGGGGATACCGGGGTGGCGTCATCCGC
CGCGGTACGCGACCACGAGAAAGCCGGCCCGAAGGCCGGCTCTCCATGCGACGTCAGGACTCAGAACAGCTC
GCCCTTCGCCGCCTTCTCCAGCAACAGCGCCGGCGGCTCGAAGCGCTCGCCGTACTGTTCGACCAGGTATTG
GGCGCGGGCGATGAAGTCCTTCAGGCCGTACTGGTTGATGAACTGCAAGGCGCCCCCGCTCCAGGCGGCGAA
ACCGATACCGAAGATCGAGCCGATGTTCGCGTCGGCGGTGGAGTGCAATACCCCCTCCTCCACGCAACGAAC
GGTCTCGATGGCCTGGATGAACAGCAGGCGGTCGCGTACGTCCTCGGCGGATATTTGCGCATCGGGCTTCTC
GAAGCGGCTCTTGAGTTCCGCCCAGAGATGTTTCCTGCCGTTCGCCGGGTAGTCGTAGAAGCCGGCGCCGGC
CGCCTTGCCCGGGCGCTTGTACTCATTGACCATCAGGTCGATCACGGCGAACGCGGGGTGCGTCGGCAGaGC
CTTGCCCTCGGCCTCGAGGTCGCGGGCGGTCTGGTTGCGGATGTGGGTCATCAGGCTCAGCGAGACTTCGTC
GGAAATCGCCAGCGGCCCCACCGGCATACCGGCCTGGCGCGCCTGGTTGTCGATCATCGCGGCGCTCACGCC
TTCGCCGAGCATGGCGATGCCTTCGTTGGTGAAGGTGCCGAATACCCGCGAGGTGAAGAAGCCGCGGCTGTC
GTTGACCACGATCGGCGTTTTCTTGATCTGCAGCACGTAGTCGAAACCGCGTGCCAGGGTTTCGTCGCTGGT
CTTTTCGCCGCGGATGATCTCCACCAGCGGCATCTTGTCCACCGGGCTGAAGAAGTGCAGGCCGATGAACTT
CTCCGGCCGCGCCACCGCCTGGGCCAGCCCGGTGATCGGCAGGGTCGAGGTATTGGACGCCACCACCGCATC
GGCCAGGGCATGCTTCTCGGCCTCGGCGGTGACCTTGCCTTTCAGCGCGCGGTCCTCGAAGACCGCCTCGAT
GATCAGGTCGCAGCCTTCGAAATCGGCTTCGCTGACGCTCGGCACGATCCGCGCGAGGAAGGCGTCGCGCTT
CTCGGCGGACAGGTGCCCGCGCGCAACTTTCTTGTCCAGCAGCCTGGCCGAATAGGCCTTGCCCTTCTCCGC
CGCTTCCAGCGAGACGTCCTTGAGCACCACCTCGATGCCGGCCGCCGCCGATACGTAGGCGATGCCCGCGCC
CATCATCCCGGCGCCGAGCACGCCGACCTTTTTCGTCGCCCGCACCGGATACCCCTGCGGCCGCGACTTGCC
GGCGTTGATCTCGTTGAGCTGGAACCAGAAGGTGCCGATCATGTTCTTCGCCACCTGGCCGGTGGTCAGCTC
GGTGAAATAGCGCGCCTCGATCAGTTGCGCGGTGTCGAAATCGACCTGGGCGCCCTCCACCGCCGCGCACAT
GATCTTCTCGGGCGCCGGGAAGCAACCCTTGGTCTTGTCGCGCAGCACCGACGGTGCGATGGCCAGCATCTG
CGCCACGTTGGGACTGGCAGGCGTACCGCCGGGAATCTTGTAGCCGGCGCTGTCCCAGGGCTGCTTCGCCGC
CGGGTTGGCGAGGATCCAGGCGCGGGCCTTCTCCAGCATTTCCTCGGGGCTGTCGGCCAGTTCGTGGATCAG
CCCGGCCTTGAGCGCTTCCGCCGGACGCACCTTCTTGCCTTCGGCGAGGTACGGCAGGGCTTTCTCCAGACC
AAGCAGGCGCACCATACGTACCACCCCGCCGCCGCCCGGCAACAGGCCGAGAGTCACCTCCGGCAGGCCGAG
CTGCACGCCGGGATTGTCCAGGGCGATGCGGTGGTGGCAGGCCAGGCAGATCTCCCAGCCGCCGCCCAGCGC
AGCGCCGTTGATCGCGGCGACCACCGGCTTGCCGAGGGTCTCCAGGCGCCGCAGTTGGCCCTTGAGTTCGAG
GATGCCCTGGTAGAAGGCCGGGGCGTCGGCCTTGGTGACCTTGATCAGCTCGTTGAGATCGCCGCCGGCGAA
GAAGGTCTTCTTCGCCGAGGTCAGCACCACGCCGGCGATCCCCTCTTTCTCCGCCTCCAGCCGCGCGATGGT
CTTCGCCATCGCCTCGCGGTAGACACCGTTCATGGTGTTGGCGCTCTGCCCGGGCATGTCCATGGTCAGGAC
GACGACGTTGTCCTGGCCTTTTTCGTAACGGATAGCGTCAGTCATTCCGGTTCTCCCTTCACACGCGCTCGA
TGA