ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5774

TrivialName: PA14_42110

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_42110

PAO1 Ortholog Locus:

Sequence Length: 1767

Protein Length: 588

Start: 3756548

Stop: 3758314

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens] Identities = 170/616 (27%), Positives = 209/616 (33%), Gaps = 126/616 (20%)

Sequence:

TTGCACCACCAGCACCCCCTGCGCCAGCGGCGGCAATTGCAACGCCAGCGCCACCGACCAGCCCACCAGCGC
GCCCAGCAGAAGACGCAGGCCGCCATAGAAGAAGCCATTGCCCAGTTGCCGCGGACGGATGCTGGCCAGGGA
CACGCCGAGGGTGATCAGCATCAGCGGAATGGTCAGCCCGGCCATCAGGTCGACGGTATTCGCCATCCAGCG
CGGCAGTTGCAGGTCGAGCCCCATCAACAACAAGGCCAGCAACACGCTGAGCAGGATCGGATTGCCCAGCAG
CGAGCGCCAGGAGCGCTCGCCGCTCATCCAGAACACGCCGAGGCTGAAGTTGCCGATCGACATGATCAGGTA
GAACGCCACCGCCAGGGTCATCCCCGCCTCGCCGAACGCATACAGGCACACCGGCAGGCCCATGTTGCCGAC
ATTCGGGAAGCTGTAGGCCGGCACCAGCACCTGCCACTCCTGGCGCCCGAGGCGCGCCGCCGCCCAGCCCAG
CGCAGCCATGCAGACGCAGATCAGCGCGCTGGCCAGGGCCATCCGGCCGAAGCTGTGCAGGTCCACCCGGGT
ATGCGCCAGGGTGGCGAGGATCAGGCATGGCGAACCGATGTTGAACACGATGCGCGAAACGAACTCGGTCGG
ATAGGCGTGTCCGAGACGGACCCAGACATAACCGACACCGGCGCCGAACAGCACGGGCGCCATCACGGCGAA
CAACTCGGCGAGCACGGGAACCCCTTGGTTAGCCAGCTATGCAATGGCCCGCATGCTACCGCGAGGCCCCCG
TTCCGTGCCAATCTCTCGCTCCATGTCATAACCGGCGGATGCACGAGGAACCCGCATGCCTGTCACTCTCCC
GCGCCTGGCGTTGCTAGGTGCCCTGCTCTTCCCTGTGGCTGCCGCCTGGGCCGCCGAGCTCCGCCTGGAACT
GCCGGGGGGCACGCAGACCTGGAGCAGCGAAGAACTGCTCAGGCATCCGCAGGCCCGCGACCTGGACATCCC
GGCCGACGTCGCCTACCGCCGGAACATGCGCTACCGCGCCGTGCCACTGGCGGCCTTGTTGAAAGGCGTGCA
TCCCGAAGACCATTTGCAGGCCGTGGCCAGCGATGGCTTCGCCGCCGAATTGCCGGCCGCCCCGCTGCTCGC
CGAACAGGGCTCGCAAGCCTGGCTGGCGATAGAGGATCCGCAGCGCCCCTGGCCGCCGTTGGGCGCCGGCAA
GCCGTCCGCCGGGCCGTTCTATCTGGTCTGGAGCAAACCCGAGGAAAAACGCATCGGTCCGGAGCAATGGCC
CTTCCAGGTCGTCCGCATCCGCTATCAGCCCCCTCTGGCCGAACGCTTCCCGGCCCTGCTGCCGGCCGCCGA
CGCCAGCGCGGAAGTGCGCGCCGGCTTCGCCGTGTTCCAGAAGAACTGCCTGGCCTGCCACCGTCTCAACGG
TGCCGGCGACGCCCAGTTCGGCCCGGACCTGAACCTGCCGTACAACCCCACCGAGTACTTCCAGCCGCAATT
CCTCTCCCGCTACATCCGCGACCCGCAGGCGCTGCGGCAATGGCCACAGGCGAAAATGCCGGCGTTCCCGGA
ACGGGTGATCGACGACCAGGAGTTGCGCCAGCTGATCGGCTACCTGCGCCACATGGCCGGCCGCAAAGCGGG
CGCGGCCGGCTGAAGCGGCGTCAGATGTTGTACGCCGAGGGCGGCGACGGCAGGCGCTCCAGCAAGTCGTGC
AGGCCGGCGCTCCACTGGCGGCGGATGGCGCTGAAATAG

Translation:

MHHQHPLRQRRQLQRQRHRPAHQRAQQKTQAAIEEAIAQLPRTDAGQGHAEGDQHQRNGQPGHQVDGIRHPA
RQLQVEPHQQQGQQHAEQDRIAQQRAPGALAAHPEHAEAEVADRHDQVERHRQGHPRLAERIQAHRQAHVAD
IREAVGRHQHLPLLAPEARRRPAQRSHADADQRAGQGHPAEAVQVHPGMRQGGEDQAWRTDVEHDARNELGR
IGVSETDPDITDTGAEQHGRHHGEQLGEHGNPLVSQLCNGPHATARPPFRANLSLHVITGGCTRNPHACHSP
APGVARCPALPCGCRLGRRAPPGTAGGHADLEQRRTAQASAGPRPGHPGRRRLPPEHALPRRATGGLVERRA
SRRPFAGRGQRWLRRRIAGRPAARRTGLASLAGDRGSAAPLAAVGRRQAVRRAVLSGLEQTRGKTHRSGAMA
LPGRPHPLSAPSGRTLPGPAAGRRRQRGSARRLRRVPEELPGLPPSQRCRRRPVRPGPEPAVQPHRVLPAAI
PLPLHPRPAGAAAMATGENAGVPGTGDRRPGVAPADRLPAPHGRPQSGRGRLKRRQMLYAEGGDGRRSSKSC
RPALHWRRMALK*

AnnotationID:5776 GeneID:5774

AnnotatorUID: diggins

Modification Date/Time: 2005-02-28 07:07:42

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15657

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28679