ViewGene
Locus Name:
GeneID:
Location:

GeneID:5772
TrivialName: PA14_42190
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_42190
PAO1 Ortholog Locus:
Sequence Length:702
Protein Length:233
Start: 3762573
Stop: 3763274
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGACGGTAGAAACCCTCGGCCACCCGATTCAGCCCGGCAACCTTGGCAGGCAACCCGGCCAGCATGTCCTC
GGCGGATTGCTGGCTGGGCTGGGAGGGATCGAGCAGGTGCGGCCAGCCGGCGATCCAGCGCCGCACCAGTTC
CTCGGTCATTTCCGGATGGCCTTGCAGGCCGAGTACGTGATCGCCCCAGGAAAACCCCTGGTTCTCGCACCA
CGGGCTGGACAGCAGGCGCTCGGCGCCCTGCGGCAGGTCGAAGGCATCGCCGTGCCACTGGAAGATCGAGAA
GCGCTCCGGCAGCCCGGCCAGCCATGGACTGTCGCGGCTTTCCCGCTGCATGGGCTGCCAGCCCATTTCGGT
GTAGGGCTGGTGCCGCACCGTCGCGCCCAGGGCGCGGGCCAGCAACTGGCCGCCGAGGCAATGGCCGATCAG
CGGGATGCGCCGCTCGATGAAGCGACGCAGCAGCGCCAGTTCGTCGCGCAACCAGGGCAGGTCGTCGTTGAC
GCTCATCGGCCCACCCATGATCGCCACCGCTCGCGGGCGTTCGGCGTCGAGACCGGCGAGTTCGCCGAGGTC
GGCGCGGATCACGCGGAAGTCCAGGCCGCGCGCCGCCAGCACGGCACCCAGATGGCCTGGCGGACAGAACTC
GGCATGGGTCAGGATCAGAATATCGCTCATGGCTTACCTCCTTCCCCAGTCTGA
Translation:
MTVETLGHPIQPGNLGRQPGQHVLGGLLAGLGGIEQVRPAGDPAPHQFLGHFRMALQAEYVIAPGKPLVLAP
RAGQQALGALRQVEGIAVPLEDREALRQPGQPWTVAAFPLHGLPAHFGVGLVPHRRAQGAGQQLAAEAMADQ
RDAPLDEATQQRQFVAQPGQVVVDAHRPTHDRHRSRAFGVETGEFAEVGADHAEVQAARRQHGTQMAWRTEL
GMGQDQNIAHGLPPSPV*
AnnotationID:5774GeneID:5772
AnnotatorUID: diggins
Modification Date/Time: 2005-02-28 07:07:02
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:11479




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:28675




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 48774How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 1191336Stop: 1190635

          
Length: 702


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGACGGTAGAAACCCTCGGCCACCCGATTCAGCCCGGCAACCTTGGCAGGCAACCCGGCCAGCATGTCCTC 
GGCGGATTGCTGGCTGGGCTGGGAGGGATCGAGCAGGTGCGGCCAGCCGGCGATCCAGCGCCGCACCAGTTC 
CTCGGTCATTTCCGGATGGCCTTGCAGGCCGAGTACGTGATCGCCCCAGGAAAACCCCTGGTTCTCGCACCA 
CGGGCTGGACAGCAGGCGCTCGGCGCCCTGCGGCAGGTCGAAGGCATCGCCGTGCCACTGGAAGATCGAGAA 
GCGCTCCGGCAGCCCGGCCAGCCATGGACTGTCGCGGCTTTCCCGCTGCATGGGCTGCCAGCCCATTTCGGT 
GTAGGGCTGGTGCCGCACCGTCGCGCCCAGGGCGCGGGCCAGCAACTGGCCGCCGAGGCAATGGCCGATCAG 
CGGGATGCGCCGCTCGATGAAGCGACGCAGCAGCGCCAGTTCGTCGCGCAACCAGGGCAGGTCGTCGTTGAC 
GCTCATCGGCCCACCCATGATCGCCACCGCTCGCGGGCGTTCGGCGTCGAGACCGGCGAGTTCGCCGAGGTC 
GGCGCGGATCACGCGGAAGTCCAGGCCGCGCGCCGCCAGCACGGCACCCAGATGGCCTGGCGGACAGAACTC 
GGCATGGGTCAGGATCAGAATATCGCTCATGGCTTACCTCCTTCCCCAGTCTGA