ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5767

TrivialName: PA14_42420

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_42420

PAO1 Ortholog Locus:

Sequence Length: 1530

Protein Length: 509

Start: 3778426

Stop: 3779955

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK75846.1| (AE007470) cell wall surface anchor family protein [Streptococcus pneumoniae TIGR4] Identities = 96/487 (19%), Positives = 189/487 (38%), Gaps = 15/487 (3%)

Sequence:

ATGCCCCACCGCCTCGGCTCCTGCGTCTTGGGACGGCTGCACCGGCGGAATCGATTCGATTTTCATGGAACC
GCTCAAACCCTCATGCCGACCGCAGCGACCGCCTCGCGATCGCTGCCGCACGGCAGCAGGCGTTGCCAGAAC
TCGGCGTGGTCGAGCAGGTTGGCCAGGGTCGCCTCGAAGCATTCGAGGGTCAGTTGCGCTGCGAGAATCTGC
GCATACAACTGGACCTTGCCGGTCAGCTCGTCGAAGCCGAAATGCAGATCGAAACGGTGCCAATGGCGGTTG
AAGCTGGCGAGCTGGCGAAAGATCCCCTCGCCCAGCACATCGATGCCCGCCACATCGGCCTCCAGCAACAGA
CGCTCGCGCTCGGCGAGCAGCAACAGGGTGACGCCCACCTGTTCGTCGAACAGCAGGCTCGCCATGCCCTCT
TCGTCGAGGGACAGGGAAGGCAAACCGATACGGCCTGCGAACTCGGCAAGCAGTCGGTTGACCTTGCTCGTT
AAATCCATGGGGGCGCCTCCTAAAGCTCAGCGCATGCTAGCACCGGGCTATGCATCGCTTTTGTCACTGAGA
GACTTTTCTTTTAAGAAAAAAGCCACATCGCTGTGGCCTTTTTCCTCCCGCGCGGAGACGGCTCAGACCACT
CCGGCCGCCGCACGCCAGGCCTGGTTATGGCTCTGGGTGTACTGCTGGATGAGCTGCAGGACGTCCTTCATG
AAGCCGGCATCGAAGCTCATCTGGTCCTCGACCTTCTGCTTCTGGCTCTGCCCGATGGTGGCGTTGACCTCC
TCTTCCCGGGCGCTCGCCTGCGACTCGCCCTGGCGCACCTGGACCGAGGCGTTGGCCATCTGGACGAAGGAC
TGGATCACCGTGTTGGCCACCTGCAGGGCGCCGTTGCGGCTCTCGAAGGCACGGCCCGCCGCGCGCAACGCC
ACACTGTCCTGCGCCTGGTCCGCCGCCCAGACCTTGCCGACGATCTTGCGATCCTCATCGGAGGTCTTGCCC
AGCGCCTGCATCTTCGCGTCGATCAGTTCGTTGCGCCCATCGATGTTCTTCTGCAGGGTCTTCTCCTGGCTG
ATGGCCTTGCCGTTCTTCAACGCGCCGAGACTGCCGACCACTGCCGAGGCCAACGCGCCGACGCCGGCGATC
ACCGCCATGGCGATCATCAGCGTGGCGCCGCTGCGCATCTCGTCCACCTGCGCCTTCTGCGCGTGGATGATC
GCCTGGTTCTCGTTGTCGCGCTGGAGCACGCCCAGCTCGCGCGCCTTCTGCGCGATGCGGAAGAGAATCAGC
AGAAGCTCGACGCTGCTGTCCAGCTCGCTGCCGGCCGCTTCCATGCGCACCGGGTCGAGCACCTGGCGCGGA
GCGTTCAGTTCGACCCGGTCGGCCCGCGCGGCCGGCACCTGCGGCAGCTCCGCAGCCGCTTGCGGCGTGCCG
ACGGAACGCCCGGCGGCGCCGGGAGCGATCGGCTCGGAGGGGATCGCGGCCTGGGTAGCCGCCAGGGAATAT
TGCGTATCGATCATGTGA

Translation:

MPHRLGSCVLGRLHRRNRFDFHGTAQTLMPTAATASRSLPHGSRRCQNSAWSSRLARVASKHSRVSCAARIC
AYNWTLPVSSSKPKCRSKRCQWRLKLASWRKIPSPSTSMPATSASSNRRSRSASSNRVTPTCSSNSRLAMPS
SSRDREGKPIRPANSASSRLTLLVKSMGAPPKAQRMLAPGYASLLSLRDFSFKKKATSLWPFSSRAETAQTT
PAAARQAWLWLWVYCWMSCRTSFMKPASKLIWSSTFCFWLCPMVALTSSSRALACDSPWRTWTEALAIWTKD
WITVLATCRAPLRLSKARPAARNATLSCAWSAAQTLPTILRSSSEVLPSACIFASISSLRPSMFFCRVFSWL
MALPFFNAPRLPTTAEANAPTPAITAMAIISVAPLRISSTCAFCAWMIAWFSLSRWSTPSSRAFCAMRKRIS
RSSTLLSSSLPAASMRTGSSTWRGAFSSTRSARAAGTCGSSAAACGVPTERPAAPGAIGSEGIAAWVAAREY
CVSIM*

AnnotationID:5769 GeneID:5767

AnnotatorUID: diggins

Modification Date/Time: 2005-02-28 07:07:54

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11470

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28665