ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5762

TrivialName: PA14_42810

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_42810

PAO1 Ortholog Locus:

Sequence Length: 1659

Protein Length: 552

Start: 3808570

Stop: 3806912

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE41948.1| (BX640416) autotransporter [Bordetella pertussis] Identities = 42/139 (30%), Positives = 53/139 (38%), Gaps = 20/139 (14%)

Sequence:

GTGGCTTTTCACCAGCGGGCTGCGTCCGTCCTTGCGCGCGGCCTTGCCATGGGTCACGCGCACGCAGCGGAT
TTCCAGGCGGGTGGCCTCGGCAAGGAAGTCCCACAGCGTCTGCCGGGCCTTCTCCACGCTCATGCCGTGCAG
GTCGAGGCTACCGTCGAAGGGCACCAGGCCCTGCTTGAGCTTGCGCAACTGGCTTTCCTGGACGCCGTCGCG
GGCCCAGGACAGCTCGTCCTCGGGGCCGACGTCGATGACGAACTGGTCGGACAGGCCGTCGACGCGGATTTC
GTCGTTGCGCACGCTGGCATTGAGCTGGCGCTGCTTGAGTTGCTGGCGGTCGTTGCGAGGTTTGCCGGTATC
GGCTCGATCGACCGAGATGCGCTTGACGCCGCGCATCTCGCTCTTGAACAGGGAAAAGTCGTCGTCTTGCAT
GGGAGCCTCCGCGAAGCGGCGCAGTTTACCGGATCGGCCGCACGCCGGCAGCCCGCTCAGTCGCGCTTTTTC
ATCAGGTTCGGCGACAGGCTCAGGTCGCTGTTGCGGCGGCTGCGGCGGCGGCTGAAACGCCAGAAGAACACG
CCGAGGCAGAGCGACAGCAGGCCAAGGGCCAGCAATACGCCGCCGGCGGCGGGTTCGATATGCAGCATGCCG
ACAGCCGGCTGGCGGCCGATCAAGGCCGAGGTGCCGGCCAGCGACAGCAGCACGCCCAGGCTCGCCACCAGG
GCCGCGAACGCCGCCGCCAGGCGCCAGCGCCAGATTCTCGGCCGGCGCGGGCGCAGCCGGCGCGCATCGAAA
CTATCGGACAGCTTCATCCCGACTTCCTCGTGTGTCATCGGGGCTAGGACCGGAACCTTCCGGCCGGGTTCC
CGGATTCCCGGGAGCCGTGGGCAAACCGTGCGCCACTCGTCTTCTCGCCGCAAGCCATGGCCCTGCAGGCAG
ACTAGTCCTCCGCAGGGCGGGACGGGAGGGCGGCTGGATGGGCGGTCAGAGCAGTTCCCGGGCCTGGGCGAC
GATCGCCGCGAAGTTGTCGCCGAGGGCGGCGATCTCGGCGCGTTGCAGGTCCGCGGCGCTCAGGACCCCGCC
GTTCAGGGTGGGTATGTCGCGGGTGGCGCAGGCGCTGTCGGCGAGGGTGCAGCGGTAGCCGTAGTCCTTGGC
CGCGCGCACGGTGGTGCTGACGCTGGAATGGGTCATGAAACCGCAGACGATCAGGTCGAGACGGCCGTGGTT
CTGCAGCAGGTCGTGCAGCTCGGTGCCGGAGAAGGCATTGGGCAGGCGTTTCTCCACGACCTTTTCCCCGGC
TTCCGGTTGCAGTTCCGGGAGGAACTGGCCGCGCGGACCCTGCGGATCGAACAGGCCACCCTGGATACCCAG
GTGGCGCACATGCACGATGGGCGTACCGTTGGCGCGGGCCGCCTGCACCAGCACGCCGATTTCCGCGGCGGC
AGCGTCCAGGCCTGGCAGGCTCAGGGCGCCGCTGCGGTACTCTTCCTGGGCATCGATGATCAGCAAGGTGCT
CTGCCGAAGGGGGGCTGGCGGGTAGCCGCGTCCGCTGATCTGCAAAAGGGTGAGCGGATGAGGCATGTCACT
ACTCCTGAGAAGGCACATGCCTTTCATTCTGGCCCCTATCGGCGAGCCTGTGAACCTTTGCCGCATGCGCAC
TAA

Translation:

MAFHQRAASVLARGLAMGHAHAADFQAGGLGKEVPQRLPGLLHAHAVQVEATVEGHQALLELAQLAFLDAVA
GPGQLVLGADVDDELVGQAVDADFVVAHAGIELALLELLAVVARFAGIGSIDRDALDAAHLALEQGKVVVLH
GSLREAAQFTGSAARRQPAQSRFFIRFGDRLRSLLRRLRRRLKRQKNTPRQSDSRPRASNTPPAAGSICSMP
TAGWRPIKAEVPASDSSTPRLATRAANAAARRQRQILGRRGRSRRASKLSDSFIPTSSCVIGARTGTFRPGS
RIPGSRGQTVRHSSSRRKPWPCRQTSPPQGGTGGRLDGRSEQFPGLGDDRREVVAEGGDLGALQVRGAQDPA
VQGGYVAGGAGAVGEGAAVAVVLGRAHGGADAGMGHETADDQVETAVVLQQVVQLGAGEGIGQAFLHDLFPG
FRLQFREELAARTLRIEQATLDTQVAHMHDGRTVGAGRLHQHADFRGGSVQAWQAQGAAAVLFLGIDDQQGA
LPKGGWRVAASADLQKGERMRHVTTPEKAHAFHSGPYRRACEPLPHAH*

AnnotationID:5764 GeneID:5762

AnnotatorUID: diggins

Modification Date/Time: 2005-02-27 19:07:57

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15645

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28655