ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5760

TrivialName: PA14_43010

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:33

LocusName: PA14_43010

PAO1 Ortholog Locus:

Sequence Length: 2517

Protein Length: 838

Start: 3826981

Stop: 3829497

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE32808.1| (BX640444) adhesin [Bordetella bronchiseptica] Identities = 166/681 (24%), Positives = 243/681 (35%), Gaps = 107/681 (15%)

Sequence:

ATGGACGAACCAGGCATCGAAGCGGTACAGCGCCAGGCCGAGGCGTCACCCTGGCGGGCCGCCGCGAGGCCG
TCGAAGAACACGTCGGCGGAACCGACGACGATGGGATTGCTGCCGTGCCCGGGGAGCGGACAAGCGGTTGGA
TCGGAAACGCGGGCTGCGGGTTTGCCGGACATCGAAACCTCCTTAGCTGACCTTCACCTGGCCGCTGCCATC
CAGGCATGCGGAAAAACTCACCTGGCGCTTGAAACCTTCCACCTCCAGCAACCCTTCGATGCTGAAGGCCAG
GCGGAGCTGGTCGTTGTCGCGCGGCAGGGAAACGACACGCACGTTGCTCAAGCGCGGTTCGTAAGCCTCGAT
GAAACCTTCGATGGCCGAGCGGGCCTGGCTCAGGGAGTCGTGCAGGCTCAGGCGCATGTCGTTGAGATCGGG
CAACCCGTAGTCGGACAGCGTCTGCACGCTGCCCGCCCGGGTGCTGAGCATCTTGCCCAGATGGGCAGCCAC
CGACGCCATGGCGGAAACCTCGCGGCTCCAGCCGACGCGCTTATCCGCGTCGCCGTTCAGGCGCTCGAACAG
GCTGCCGTATCCGGTCATGGAAAGCTCCGCTTACTCTTTGTCCAGCTTGCCGACCAGCGACAGGGTGAAGTC
CGCCCCCATGTACTTGAAGTGCGGGCGCACGTTCAGGCTGACGCGGTACCAGCCCGGCTCGCCCTCGACGTC
ACTGACGATGATCTGTGCAGCGCGCAGCGGGCGACGGCCGCGCACTTCGGCGCTGGGGTTTTCCTGGTCGGC
GACGTACTGGCGGATCCACTTGTTCAGCTCCAGCTCGAGGTCGGTACGCTCCTTCCACGACCCCAGCTGTTC
GCGTTGCAGGACCTTCAGGTAATGGGCCAGGCGGTTGACGATCATCATGTACGGCAACTGGGTGCCGAGCTT
GTAGTTCAGCTCCGCGGCCTTGCCTTCGGCGCTGATGCCGAAGAACTTCGGCTTCTGCACCGAGCTGGCGGA
GAAGAACGCGGCGTTGTCGCTGCCCTTGCGCATGGTCAGGGAAATGAAGCCTTCCTCGGCCAGTTCGTACTC
GCGGCGATCGGACACCAGCACCTCGGTGGGGATCTTGGTCTCGATCTCGCCCATGCTCTCGAAGTGGTGCAA
AGGCAGGTCCTCCACCGCACCGCCGCTCTGCGGCCCGATGATGTTCGGGCACCAGCGATACTTGGCGAAGCT
GTCGGTCAGCTTGGTGCCGAAGGCATAGGCGGTGTTGCCCCACAGGTAATGCTCATGGCTATTGGCCACGGT
CTCCTTGTAGGCGAACGACTTGACCGGATTCTCTTCCGGATCGTAGGGCGTGCGCAGCAGGAAGCGCGGTAC
GGTCAGCGCCACGTAGCGGGAATCCTCGGACTGGCGGAAGCTCTGCCACTTGGCGAACTGCGGGCCTTCGAA
ATGATCCTTCAGGTCCTTCAGGTCCGGCAGGCCGGTGAAGCTTTCCAGGCCGAAGAACTTCGGACCGGCGGC
CGCCACGAACGGCGCATGGGCCATGCAGGCCACGCTGGAGACGTATTGCATCAGCTTGACGTCGGGCGAACT
GGGCGACATGTAGTAGTTGGCGATGATGGCGCCGACCGGCTGGCCACCGAACTGGCCGTATTCGGCGGTGTA
GATGTGCTTGTACAGGCCGGACTGCATCACCTCGGGCGAGTCCTCGAAATCGTCCAGCAGGTCCTGCTTGGA
AACGCTGAGAATCTCGATCTTGATGTTCTCGCGGAAGTTGGTGCGGTCGACCAGCAGTTGCAGGCCGCGCCA
GGCCGACTCCAGCGCCTGGAAATCGGGATGATGGAGGATCTCGTCCATCTGCGTGCTGAGCTTGGCATCGAT
CTCGGCGATCATCCGGTCGACCATCGCCTTCTTCACCGGCTCGCCGTCGTTCTGCGGCTTGAGCAATTCCTC
GATGAAGGCGGAGACGCCGCGCTTGGCGATGTCGTAGGCCTCGTCGTCCGGGCTCAGGCGGGTCTCGGCGAT
GATGCTGTCGAGAATGTTGTATTCGCCGTTCTGGTTCCGGCCTTGCTGTGCGGCACTGGTGCTCATGTATCT
GCTTCCTTGGCTAGGGGTGGCTCAGGCGTCCTGGGAGGGGGCGGCGCTCAGCCCCAGCTCGCCCAGCACACG
GCTACGGGACTCGTCGTCGGCGAGTACGCTTTCGATGGCCTTGCGGAACGCCGGGGCGTTGCCCAGCGGGCC
CTTGAGGGCCACCAGCGCATCGCGCAACTCCATCAGCTTCTTCAGCTCGGGCACCTGCTCGACGATGCTGGC
CGGGTTGAAGTCCTTCATCGAGTTGATCTGCAGCCCCACCGCCAGCTCGTCGCTGCCGCCCTCCTCCTGGAG
ACGATTGGGTACGCTCAGCGTCAGCCCCAGCTCCTGCTTGGCCAGGACCTCGTCGAAGGTCATCTTGTCGAT
GCCGATCGGCTTGCGGTCCTCCACCTTGCGCTCATCCCCGCGCTGGGTGTAATCGCCGATCGCCAGTAG

Translation:

MDEPGIEAVQRQAEASPWRAAARPSKNTSAEPTTMGLLPCPGSGQAVGSETRAAGLPDIETSLADLHLAAAI
QACGKTHLALETFHLQQPFDAEGQAELVVVARQGNDTHVAQARFVSLDETFDGRAGLAQGVVQAQAHVVEIG
QPVVGQRLHAARPGAEHLAQMGSHRRHGGNLAAPADALIRVAVQALEQAAVSGHGKLRLLFVQLADQRQGEV
RPHVLEVRAHVQADAVPARLALDVTDDDLCSAQRATAAHFGAGVFLVGDVLADPLVQLQLEVGTLLPRPQLF
ALQDLQVMGQAVDDHHVRQLGAELVVQLRGLAFGADAEELRLLHRAGGEERGVVAALAHGQGNEAFLGQFVL
AAIGHQHLGGDLGLDLAHALEVVQRQVLHRTAALRPDDVRAPAILGEAVGQLGAEGIGGVAPQVMLMAIGHG
LLVGERLDRILFRIVGRAQQEARYGQRHVAGILGLAEALPLGELRAFEMILQVLQVRQAGEAFQAEELRTGG
RHERRMGHAGHAGDVLHQLDVGRTGRHVVVGDDGADRLATELAVFGGVDVLVQAGLHHLGRVLEIVQQVLLG
NAENLDLDVLAEVGAVDQQLQAAPGRLQRLEIGMMEDLVHLRAELGIDLGDHPVDHRLLHRLAVVLRLEQFL
DEGGDAALGDVVGLVVRAQAGLGDDAVENVVFAVLVPALLCGTGAHVSASLARGGSGVLGGGGAQPQLAQHT
ATGLVVGEYAFDGLAERRGVAQRALEGHQRIAQLHQLLQLGHLLDDAGRVEVLHRVDLQPHRQLVAAALLLE
TIGYAQRQPQLLLGQDLVEGHLVDADRLAVLHLALIPALGVIADRQ*

AnnotationID:5762 GeneID:5760

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:48

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11457

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28651