ViewGene

Locus Name:
GeneID:
Location:

GeneID:5759
TrivialName: PA14_43060
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_43060
PAO1 Ortholog Locus:
Sequence Length:1938
Protein Length:645
Start: 3833757
Stop: 3831820
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAN81835.1|AE016765_237 (AE016765) Hypothetical protein [Escherichia coli CFT073]
Identities = 48/141 (34%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Sequence:
GTGGATTTCCTCGCCCTTCGGACCGGTCACCACCGCGCTCTGCGTGCCGAGGATGCGCGGCTTCGGCGGTGT
CAGCGGGGGACGGAAGAACGCCTCCCAGGGCGTGGCCTGGAAGCGGTTGCGGTAACCCTGCCGGAAGTCGTC
CGGGCTCGCCGAGGTGTCGGAGACGATGCTTTCTTCCAGCACCTGCGGCTGCCGCCCCTCGTGAATCACCTC
GGTGAGCAGCCAGAGGTCGTTCCAGCCCGCCTGGGGATGGGCGGCCAGCGGCAGGAAGTGGCCGCTGAGCAG
CAACGGTTGGTCGCTGCGGCCCTCGGCCAGGCGGTAGTCGCTGCGCTGCCGTTCGAGGGCACGCCTGGCCAG
GTGCTTGCCGCGCTCGCGGTCGACGAAGCGACCGGGATAGTCGTAGTCCTCGAGGTCCGGCCGGGCTTCGCC
GCGGGCGGCGCTTTCCAGCGTCAGGCGCGGTTTCTCGAAGTCGTAGTCGCGGCGGGTGACGCGGCTGGTGCG
GGTTTCCAGGCGTACGCCGAAGCGCTTGACCGCCGGCCGGTCGGCGACCAGGCCGGAGTCCTGCTGGTAGGC
CACCGGCGCGAGCCGCGGGAACACCGTCTGGTCGTCGCCGAATACCAGCAGGTGCGCCGTGGCGCTGTGCTG
GAAATGAAAGTGGATGCCCTCCTCGCAGCACAGGCGCTGGACGAACTGCAGGTCGCTCTCGTCGTACTGCAC
GCAGTATTCGCGCTCGGGGTAGCGGGTGCCGAGCTGGAAGCGGTAGGCGTCGGCGAGGATGCCGTGTTCCTC
CAGCACCCGGCCGACGATCTGCGGCACCGTGAGGTGCTGGAAGATGCGCTGGTTGGTGCGCTGGGCGAGGTA
GGCCAGTTGCGGGACGAGGGTGATGCGGTAGCGGGTCAGGCGCTTGCCCGAGTCGCCCTGTCCGGCGCTGCG
CACCAGGCCGTGGATACCGTTGCCGGCGGGCCCGAGGGTAAGGAAGGCGGGTTTGTGCAGCAGGCTTTCGAG
GTCCGGCACGGGGCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCT
GAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAGTGGGTCTGGTTGGCTGCTGC
GAACATCCGTTGTCCCTCACTGGCGCAGGCGACCGAATCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGC
GCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCTTTCCTGGCCACGGCGC
TGTGGGTCATCGAGGGCACGACGGCCAGCGAGGCGGGCCGCGTGCGGCGGTCGgagcTCAGCCGGCGACCGG
GGAGCGCCAGTCGTCGGAGCCGGAGGTGCCGGAGACTTCGTGGGTCCAGGTGATCTTGCGGTAGGTGAAGTG
CACGTCTTCCAGGTGGGTGAAGTGGGCGTTGCCCGGGTCCTGGCAGTTATGCATGTAGTCCTTGATGTCGAC
GATGATCGCGTCTTCCAGGACGGTGGTGTAGTAGTGCTCCTGGGTGCCGGCGGCGGAGGTGCGGTACCACTG
GATCTCGACCTTGGTCAGGCGCTCGCCGGAGGTCAGGGCGGCCAGCAGCAGCGGCGAGGCCTTGTCGAAGAC
CTTGGTGATGACCACCGGCTTGTGCACGCGCTGACCGGTCGGCTGGCCGGACTGCGGATCGCGCGGGATGAT
CACTTCGTGGTTGAAGCCCTGGACCATCACTTGGTCCTCGTGGCCTTCCTGGTAGGTGTTGCCGACCGAATC
CTCGGTGAAGGCGCCGGCGGTGATCAGGCCCTGCTTGGTGCCGGTGATGGACATATAGGCGGGGGTTGCCAT
GGATGCTCTCCTTGCGTGAGTAGGAAATCCCGCGGGTTGGACCACCCCTCGGGCAACTTCACCTAA
Translation:
MDFLALRTGHHRALRAEDARLRRCQRGTEERLPGRGLEAVAVTLPEVVRARRGVGDDAFFQHLRLPPLVNHL
GEQPEVVPARLGMGGQRQEVAAEQQRLVAAALGQAVVAALPFEGTPGQVLAALAVDEATGIVVVLEVRPGFA
AGGAFQRQARFLEVVVAAGDAAGAGFQAYAEALDRRPVGDQAGVLLVGHRREPREHRLVVAEYQQVRRGAVL
EMKVDALLAAQALDELQVALVVLHAVFALGVAGAELEAVGVGEDAVFLQHPADDLRHREVLEDALVGALGEV
GQLRDEGDAVAGQALARVALSGAAHQAVDTVAGGPEGKEGGFVQQAFEVRHGAFADQLQVEGERLADGFAAA
EGEHLQVEGEAVDGEAEVGLVGCCEHPLSLTGAGDRIDCPAWRGRDKGAQARSEAAYNKAASTRRGLSWPRR
CGSSRARRPARRAACGGRSSAGDRGAPVVGAGGAGDFVGPGDLAVGEVHVFQVGEVGVARVLAVMHVVLDVD
DDRVFQDGGVVVLLGAGGGGAVPLDLDLGQALAGGQGGQQQRRGLVEDLGDDHRLVHALTGRLAGLRIARDD
HFVVEALDHHLVLVAFLVGVADRILGEGAGGDQALLGAGDGHIGGGCHGCSPCVSRKSRGLDHPSGNFT*
AnnotationID:5761GeneID:5759
AnnotatorUID: diggins
Modification Date/Time: 2005-02-27 17:05:39
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15641
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28649
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48761How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1120152Stop: 1122089
Length: 1938
Start Codon: GTGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGATTTCCTCGCCCTTCGGACCGGTCACCACCGCGCTCTGCGTGCCGAGGATGCGCGGCTTCGGCGGTGT
CAGCGGGGGACGGAAGAACGCCTCCCAGGGCGTGGCCTGGAAGCGGTTGCGGTAACCCTGCCGGAAGTCGTC
CGGGCTCGCCGAGGTGTCGGAGACGATGCTTTCTTCCAGCACCTGCGGCTGCCGCCCCTCGTGAATCACCTC
GGTGAGCAGCCAGAGGTCGTTCCAGCCCGCCTGGGGATGGGCGGCCAGCGGCAGGAAGTGGCCGCTGAGCAG
CAACGGTTGGTCGCTGCGGCCCTCGGCCAGGCGGTAGTCGCTGCGCTGCCGTTCGAGGGCACGCCTGGCCAG
GTGCTTGCCGCGCTCGCGGTCGACGAAGCGACCGGGATAGTCGTAGTCCTCGAGGTCCGGCCGGGCTTCGCC
GCGGGCGGCGCTTTCCAGCGTCAGGCGCGGTTTCTCGAAGTCGTAGTCGCGGCGGGTGACGCGGCTGGTGCG
GGTTTCCAGGCGTACGCCGAAGCGCTTGACCGCCGGCCGGTCGGCGACCAGGCCGGAGTCCTGCTGGTAGGC
CACCGGCGCGAGCCGCGGGAACACCGTCTGGTCGTCGCCGAATACCAGCAGGTGCGCCGTGGCGCTGTGCTG
GAAATGAAAGTGGATGCCCTCCTCGCAGCACAGGCGCTGGACGAACTGCAGGTCGCTCTCGTCGTACTGCAC
GCAGTATTCGCGCTCGGGGTAGCGGGTGCCGAGCTGGAAGCGGTAGGCGTCGGCGAGGATGCCGTGTTCCTC
CAGCACCCGGCCGACGATCTGCGGCACCGTGAGGTGCTGGAAGATGCGCTGGTTGGTGCGCTGGGCGAGGTA
GGCCAGTTGCGGGACGAGGGTGATGCGGTAGCGGGTCAGGCGCTTGCCCGAGTCGCCCTGTCCGGCGCTGCG
CACCAGGCCGTGGATACCGTTGCCGGCGGGCCCGAGGGTAAGGAAGGCGGGTTTGTGCAGCAGGCTTTCGAG
GTCCGGCACGGGGCGTTCGCCGACCAGCTCCAGGTCGAAGGCGAACGGCTGGCTGATGGCTTCGCGGCCGCT
GAAGGAGAGCACCTGCAGGTCGAGGGCGAGGCCGTCGATGGCGAGGCTGAAGTGGGTCTGGTTGGCTGCTGC
GAACATCCGTTGTCCCTCACTGGCGCAGGCGACCGAATCGATTGTCCTGCCTGGCGCGGGCGAGACAAGGGC
GCGCAGGCTCGATCGGAAGCTGCCTACAACAAAGCGGCATCGACCCGGCGCGGGCTTTCCTGGCCACGGCGC
TGTGGGTCATCGAGGGCACGACGGCCAGCGAGGCGGGCCGCGTGCGGCGGTCGgagcTCAGCCGGCGACCGG
GGAGCGCCAGTCGTCGGAGCCGGAGGTGCCGGAGACTTCGTGGGTCCAGGTGATCTTGCGGTAGGTGAAGTG
CACGTCTTCCAGGTGGGTGAAGTGGGCGTTGCCCGGGTCCTGGCAGTTATGCATGTAGTCCTTGATGTCGAC
GATGATCGCGTCTTCCAGGACGGTGGTGTAGTAGTGCTCCTGGGTGCCGGCGGCGGAGGTGCGGTACCACTG
GATCTCGACCTTGGTCAGGCGCTCGCCGGAGGTCAGGGCGGCCAGCAGCAGCGGCGAGGCCTTGTCGAAGAC
CTTGGTGATGACCACCGGCTTGTGCACGCGCTGACCGGTCGGCTGGCCGGACTGCGGATCGCGCGGGATGAT
CACTTCGTGGTTGAAGCCCTGGACCATCACTTGGTCCTCGTGGCCTTCCTGGTAGGTGTTGCCGACCGAATC
CTCGGTGAAGGCGCCGGCGGTGATCAGGCCCTGCTTGGTGCCGGTGATGGACATATAGGCGGGGGTTGCCAT
GGATGCTCTCCTTGCGTGAGTAGGAAATCCCGCGGGTTGGACCACCCCTCGGGCAACTTCACCTAA