ViewGene

Locus Name:
GeneID:
Location:

GeneID:5751
TrivialName: PA14_43390
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_43390
PAO1 Ortholog Locus:
Sequence Length:2178
Protein Length:725
Start: 3863781
Stop: 3865958
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 143/524 (27%), Positives = 187/524 (35%), Gaps = 124/524 (23%)
Sequence:
TTGCGAAGCGTCCGCCGCCTGCACCCGCACGCCGCGCAAGGCCAGTGGGATCAACGCGACGATGATCAGCGC
GTTGAACACGATGGCCGACAGGATCGCGCTCTGCGGGCTTTGCAGGCGCATCACGTTGAGCACGTCGAGCTG
CGGGTAGATGCCGACGAACAGCGCCGGCAGGATGGCGAAGTACTTGGCCACGTCGTTGGCGATGGAGAAGGT
GGTCAGCGCGCCGCGGGTGACCAGCAACTCCTTGCCCACCTGGACCACGTCGAGCAGCTTGGTCGGGTCGCT
GTCCAGGTCGACCAGGTTGGCCGCCTCGCGGGCGGCCTGGGTGCCGTCGTTCATGGCCATGCCGACGTCGGC
CTGGGCCAGCGCCGGGGCGTCGTTGGCACCGTCGCCGCACATCGCCACCAGGCGACCTTCGCCCTGCTCCTG
GCGAATCCGCGCCAGTTTCTTCTCCGGGGTAGCCTCGGCGATCACGTCGTCGACCCCAGCCTCGGCGGCGAT
GGCAGCGGCGGTCAGCGGGTTGTCGCCGGTCACCATCACAGTGCGGATGCCCAGCCGGCGCAGTTCGGCGAA
GCGCTCGCGAATGCCCGGCTTGACCACGTCCTTCAGGTGAATGGCGCCGAGCAGCCGGCCGTTGGCTACCAC
CAGCAGCGGGGTGCCGCCGCTCTGGGCGATCTTGTCCACCTCCCGCGAAAGCACCTCGGGCATCTTCTCCCG
CGGCAGGTCGATGAAGCGCAGCGCCGCATCCACCGCCCCCTTGCGGTACACCTGGCCGTTCCAGTCGACCCC
GGACAGGCGGGTTTCCGCGCTGAAGGCGATCGGCGTCAGCTCCTCGCGGCGCGGCTCCTCGATCGGATGCAG
GATGCGCAGGTATTCGACGATCGACTTGCCTTCCGGCGTGTCATCGGCCAGCGAGGCCAGCAACGCGCCCTC
GGCCAGTTCCTTGCCGCTCACCCCCGGCGCGGCGTACAGCGCGCTGCAGCGGCGGTTGCCGAAGGTGATGGT
GCCGGTCTTGTCGAGCAGCAGCACGTGGACGTCGCCGGCCGCCTCCACCGCGCGACCGGACTTGGCGATCAC
GTTCAGGCGCACCAGGCGGTCCATACCGGCGATGCCGATGGCCGAGAGCAGGCCGCCGATGGTGGTCGGGAT
CAGCGTCACCAGCAGCGCCACCAGGAACACCAGCGGCAGGTTGCCGCCGGCGAACAGGGCGAACGGCTTGAG
GGTCACCACCACCAGCAGGAAGATCAGGGTCAGGCCGATCAGCAGGATGTCCAGCGCTACTTCGTTGGGGGT
CTTCTGCCGCTTGGCGCCTTCCACCAGGGCGATCATCCGGTCCAGGGTCGACTCGCCCGGGTTGGCGCCGAT
CCGTACCAGCAGCCAGTCGGACACCACCTGGGTGTTGCCGGTCACCGCCGAGCGGTCGCCGCCGGACTCGCG
GATCACCGGCGCCGATTCGCCGGTGATGGCGGCCTCGTTGACCGCCGCCACGCCTTCGATGACTTCGCCGTC
GCCGGGAATCATCTCGCCGGCCTGGACCCGTACCACGTCGCCCTTGCGCAGGCTGCTGGCAGCGACGCTCTC
GAAACTGCCGTCGGCGCGCCGCTTATTGGCGGAGAGGCCCTGGCTGCCGGCCTTGAGACTGTCCGCGCGGGC
CTTGCCACGCCCCTCGGCGAGCGCTTCGGCGAAGTTGGCGAAGAGCACGGTGAACCACAGCCAGAGGGCGAT
CTGCAGCGCCACCGAGGTCGGCACCGCCTGGTCGGGGATGAAGCACAGCAAGGTGGTGAGCACGGCGGTCAG
TTCGACCACCAGCATCACCGGCGAGCGCAGCAACTGGCGCGGGTCGAGCTTGACGAAGGCTTGCAGCAGCGC
CGGCCGCCACAAGGCGGCGAGGCTGGTGGACGCGTTGTGGCGACGTTCGAGCGATTTGTGCAAGGCGTTCTT
GGACGCCTGGGTCTGAGCGTTCATGTGCGATTCCTTCAGAAGCCGAGGCTCAGTTGTTCAGCGATCGGGCCG
AGGGCCAGGGTCGGCAGGAAGGTCAGGCCGCCGACCAGCAGGATGGTCACGGTGAGCAGGCTGACGAACAGC
GGACCATGGGTCGGGAAACTGTTCGGCCCCACCGGGCTGGCCTTCTTCGCCGCCAGGCTGCCGGCGATGGCG
AGGATCGGCAGGATGTAG
Translation:
MRSVRRLHPHAAQGQWDQRDDDQRVEHDGRQDRALRALQAHHVEHVELRVDADEQRRQDGEVLGHVVGDGEG
GQRAAGDQQLLAHLDHVEQLGRVAVQVDQVGRLAGGLGAVVHGHADVGLGQRRGVVGTVAAHRHQATFALLL
ANPRQFLLRGSLGDHVVDPSLGGDGSGGQRVVAGHHHSADAQPAQFGEALANARLDHVLQVNGAEQPAVGYH
QQRGAAALGDLVHLPRKHLGHLLPRQVDEAQRRIHRPLAVHLAVPVDPGQAGFRAEGDRRQLLAARLLDRMQ
DAQVFDDRLAFRRVIGQRGQQRALGQFLAAHPRRGVQRAAAAVAEGDGAGLVEQQHVDVAGRLHRATGLGDH
VQAHQAVHTGDADGREQAADGGRDQRHQQRHQEHQRQVAAGEQGERLEGHHHQQEDQGQADQQDVQRYFVGG
LLPLGAFHQGDHPVQGRLARVGADPYQQPVGHHLGVAGHRRAVAAGLADHRRRFAGDGGLVDRRHAFDDFAV
AGNHLAGLDPYHVALAQAAGSDALETAVGAPLIGGEALAAGLETVRAGLATPLGERFGEVGEEHGEPQPEGD
LQRHRGRHRLVGDEAQQGGEHGGQFDHQHHRRAQQLARVELDEGLQQRRPPQGGEAGGRVVATFERFVQGVL
GRLGLSVHVRFLQKPRLSCSAIGPRARVGRKVRPPTSRMVTVSRLTNSGPWVGKLFGPTGLAFFAARLPAMA
RIGRM*
AnnotationID:5753GeneID:5751
AnnotatorUID: diggins
Modification Date/Time: 2005-02-27 15:03:07
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15632
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28633
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48753How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1090128Stop: 1087951
Length: 2178
Start Codon: TTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCGAAGCGTCCGCCGCCTGCACCCGCACGCCGCGCAAGGCCAGTGGGATCAACGCGACGATGATCAGCGC
GTTGAACACGATGGCCGACAGGATCGCGCTCTGCGGGCTTTGCAGGCGCATCACGTTGAGCACGTCGAGCTG
CGGGTAGATGCCGACGAACAGCGCCGGCAGGATGGCGAAGTACTTGGCCACGTCGTTGGCGATGGAGAAGGT
GGTCAGCGCGCCGCGGGTGACCAGCAACTCCTTGCCCACCTGGACCACGTCGAGCAGCTTGGTCGGGTCGCT
GTCCAGGTCGACCAGGTTGGCCGCCTCGCGGGCGGCCTGGGTGCCGTCGTTCATGGCCATGCCGACGTCGGC
CTGGGCCAGCGCCGGGGCGTCGTTGGCACCGTCGCCGCACATCGCCACCAGGCGACCTTCGCCCTGCTCCTG
GCGAATCCGCGCCAGTTTCTTCTCCGGGGTAGCCTCGGCGATCACGTCGTCGACCCCAGCCTCGGCGGCGAT
GGCAGCGGCGGTCAGCGGGTTGTCGCCGGTCACCATCACAGTGCGGATGCCCAGCCGGCGCAGTTCGGCGAA
GCGCTCGCGAATGCCCGGCTTGACCACGTCCTTCAGGTGAATGGCGCCGAGCAGCCGGCCGTTGGCTACCAC
CAGCAGCGGGGTGCCGCCGCTCTGGGCGATCTTGTCCACCTCCCGCGAAAGCACCTCGGGCATCTTCTCCCG
CGGCAGGTCGATGAAGCGCAGCGCCGCATCCACCGCCCCCTTGCGGTACACCTGGCCGTTCCAGTCGACCCC
GGACAGGCGGGTTTCCGCGCTGAAGGCGATCGGCGTCAGCTCCTCGCGGCGCGGCTCCTCGATCGGATGCAG
GATGCGCAGGTATTCGACGATCGACTTGCCTTCCGGCGTGTCATCGGCCAGCGAGGCCAGCAACGCGCCCTC
GGCCAGTTCCTTGCCGCTCACCCCCGGCGCGGCGTACAGCGCGCTGCAGCGGCGGTTGCCGAAGGTGATGGT
GCCGGTCTTGTCGAGCAGCAGCACGTGGACGTCGCCGGCCGCCTCCACCGCGCGACCGGACTTGGCGATCAC
GTTCAGGCGCACCAGGCGGTCCATACCGGCGATGCCGATGGCCGAGAGCAGGCCGCCGATGGTGGTCGGGAT
CAGCGTCACCAGCAGCGCCACCAGGAACACCAGCGGCAGGTTGCCGCCGGCGAACAGGGCGAACGGCTTGAG
GGTCACCACCACCAGCAGGAAGATCAGGGTCAGGCCGATCAGCAGGATGTCCAGCGCTACTTCGTTGGGGGT
CTTCTGCCGCTTGGCGCCTTCCACCAGGGCGATCATCCGGTCCAGGGTCGACTCGCCCGGGTTGGCGCCGAT
CCGTACCAGCAGCCAGTCGGACACCACCTGGGTGTTGCCGGTCACCGCCGAGCGGTCGCCGCCGGACTCGCG
GATCACCGGCGCCGATTCGCCGGTGATGGCGGCCTCGTTGACCGCCGCCACGCCTTCGATGACTTCGCCGTC
GCCGGGAATCATCTCGCCGGCCTGGACCCGTACCACGTCGCCCTTGCGCAGGCTGCTGGCAGCGACGCTCTC
GAAACTGCCGTCGGCGCGCCGCTTATTGGCGGAGAGGCCCTGGCTGCCGGCCTTGAGACTGTCCGCGCGGGC
CTTGCCACGCCCCTCGGCGAGCGCTTCGGCGAAGTTGGCGAAGAGCACGGTGAACCACAGCCAGAGGGCGAT
CTGCAGCGCCACCGAGGTCGGCACCGCCTGGTCGGGGATGAAGCACAGCAAGGTGGTGAGCACGGCGGTCAG
TTCGACCACCAGCATCACCGGCGAGCGCAGCAACTGGCGCGGGTCGAGCTTGACGAAGGCTTGCAGCAGCGC
CGGCCGCCACAAGGCGGCGAGGCTGGTGGACGCGTTGTGGCGACGTTCGAGCGATTTGTGCAAGGCGTTCTT
GGACGCCTGGGTCTGAGCGTTCATGTGCGATTCCTTCAGAAGCCGAGGCTCAGTTGTTCAGCGATCGGGCCG
AGGGCCAGGGTCGGCAGGAAGGTCAGGCCGCCGACCAGCAGGATGGTCACGGTGAGCAGGCTGACGAACAGC
GGACCATGGGTCGGGAAACTGTTCGGCCCCACCGGGCTGGCCTTCTTCGCCGCCAGGCTGCCGGCGATGGCG
AGGATCGGCAGGATGTAG