ViewGene

Locus Name:
GeneID:
Location:

GeneID:5750
TrivialName: PA14_43410
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_43410
PAO1 Ortholog Locus:
Sequence Length:1815
Protein Length:604
Start: 3865778
Stop: 3867592
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK23765.1| (AE005853) hypothetical protein [Caulobacter crescentus CB15]
Identities = 121/455 (26%), Positives = 165/455 (36%), Gaps = 93/455 (20%)
Sequence:
TTGTTCAGCGATCGGGCCGAGGGCCAGGGTCGGCAGGAAGGTCAGGCCGCCGACCAGCAGGATGGTCACGGT
GAGCAGGCTGACGAACAGCGGACCATGGGTCGGGAAACTGTTCGGCCCCACCGGGCTGGCCTTCTTCGCCGC
CAGGCTGCCGGCGATGGCGAGGATCGGCAGGATGTAGCCGAAGCGGCCAATGAGCATGGCCAGGCCGATCAT
CAGGTTGTGGAACGGCGTGTTGGCACCGAAACCGGCAAACGCCGAGCCGTTGTTGGCGCTCCCCGAGGTGTA
GGCGTAGAGCAGTTGGCTGAAGCCGTGCGGGCCGGGGTTGGTCACCGCCGAGGCCGGTCCCGGCAGGCTGGC
GGCAATGGCGCCGAGCACCAGCACGCCGACAGGCATCACCAGCAGGGTGAAGACCAGCAGGCGGACCTCCTT
CGCCTCGAGCTTCTTGCCCAGGTACTCCGGCGTCCGCCCGACCATCAGGCCGGCGAGGAACACCGCGATCAG
GACGAACAGCAGCATGCCGTAGAGGCCGGCGCCGACGCCGCCGAAGATCACCTCGCCGAGCATCATGTTCAG
CAGCGGCAGCATGCCGCCCAGGGGGCTCAGGCTGTCGTGCATGGCGTTCACCGAGCCGTTCGAGGCGGCGGT
GGTGGTGATCGCCCAGAGCATGCTGGCGGCGGTGCCGAAGCGACTCTCCTTGCCCTCCATCGGTGCGCCCTG
CTCGACCGGCAACTGCGCCAGCGCCGGGTTCGGCTGGTATTCGGCCCACAGCGACAGGCTCAGGCCGAGGCA
GAACAGCAGCAGCATGCAGCCGAGGATCGCGCGGCTCTGGCGCAGGTCCTTCACGTAATGGCCGAAGGTGAA
TACCAGCGCCGCCGGGATCAGGATGATCGAGGCCACTTCGAACAGGTTGCTCCAGGCACTCGGGTTCTCGAA
CGGATGAGTCGAGTTGACGCCGAAGAAGCCGCCGCCGTTGGTGCCCAGTTGCTTGATGGCGATCTGGCTGGC
CGCCGGGCCGAGCGGGATGGTCTGCTCGGCGCCTTGCAAGGTGGTGGCATGGACGTAGTCGAAGAAGGTCTG
CGGCACGCCCTGCCAGACCAGCAGCAGCGCCAGCAGCAGGCACAGCGGCAGCAGCACGTAGAGGGTGCCGCG
GGTCAGGTCGACCCAGAAGTTGCCCAGCTGTCGTGTGGAGCGGCGGCTGATGCCGCGCGCCAGGGCCACCAG
CACGCAGAGGCCGACCGCCGCGCTGACGAAGTTCTGCACCGTGAGGCCGACCATCTGGCTGAAGTAGCTCAG
CGAGGCCTCGCCGCTGTAGGCCTGCCAGTTGGTGTTGGTGACGAAACTGACCGCGGTGTTGAACGCCAGGGT
CCATTCCAGGCCCGGCAGGTGCTGCGGGTTCAGCGGCAGGCTGCCCTGCAGCATGAGGATCGAGAACAGCAG
GACCAGGCCGGCCAGGTTGAATGCCAGCAGCGCCAGGGTGTAGGTCTTCCAGTCCTGCTCGCTCGCCGGATC
GACGCCGAACAGGCGATAGCAGACGCGCTCCAGTGGCGCCAGCGGCGCGCTGAGGAGATTGCGTTGGCCTTC
CATCACCTTGAAGCAGTAGCGCCCGAGGAACGGTGCAGGCACCAGGACCAGGGCGAAAAAGGCCAGGATCAA
GAGAATCTCGTGGCTGTTCATGTGCCCTCCCCTAGGCACGGTCGGCGCGTAGCAGCGCCACCAGCAAATAGA
CGAACAGTCCCGTGGCCAGGGCCAGGGACAACCAATCCAGAACGGTCATGTGTGCGATCTCTCCTTCGAACG
GCCTCTGCCGCTTGA
Translation:
MFSDRAEGQGRQEGQAADQQDGHGEQADEQRTMGRETVRPHRAGLLRRQAAGDGEDRQDVAEAANEHGQADH
QVVERRVGTETGKRRAVVGAPRGVGVEQLAEAVRAGVGHRRGRSRQAGGNGAEHQHADRHHQQGEDQQADLL
RLELLAQVLRRPPDHQAGEEHRDQDEQQHAVEAGADAAEDHLAEHHVQQRQHAAQGAQAVVHGVHRAVRGGG
GGDRPEHAGGGAEATLLALHRCALLDRQLRQRRVRLVFGPQRQAQAEAEQQQHAAEDRAALAQVLHVMAEGE
YQRRRDQDDRGHFEQVAPGTRVLERMSRVDAEEAAAVGAQLLDGDLAGRRAERDGLLGALQGGGMDVVEEGL
RHALPDQQQRQQQAQRQQHVEGAAGQVDPEVAQLSCGAAADAARQGHQHAEADRRADEVLHREADHLAEVAQ
RGLAAVGLPVGVGDETDRGVERQGPFQARQVLRVQRQAALQHEDREQQDQAGQVECQQRQGVGLPVLLARRI
DAEQAIADALQWRQRRAEEIALAFHHLEAVAPEERCRHQDQGEKGQDQENLVAVHVPSPRHGRRVAAPPANR
RTVPWPGPGTTNPERSCVRSLLRTASAA*
AnnotationID:5752GeneID:5750
AnnotatorUID: diggins
Modification Date/Time: 2005-02-27 15:03:22
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:15630
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28631
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48752How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 1088131Stop: 1086317
Length: 1815
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGTTCAGCGATCGGGCCGAGGGCCAGGGTCGGCAGGAAGGTCAGGCCGCCGACCAGCAGGATGGTCACGGT
GAGCAGGCTGACGAACAGCGGACCATGGGTCGGGAAACTGTTCGGCCCCACCGGGCTGGCCTTCTTCGCCGC
CAGGCTGCCGGCGATGGCGAGGATCGGCAGGATGTAGCCGAAGCGGCCAATGAGCATGGCCAGGCCGATCAT
CAGGTTGTGGAACGGCGTGTTGGCACCGAAACCGGCAAACGCCGAGCCGTTGTTGGCGCTCCCCGAGGTGTA
GGCGTAGAGCAGTTGGCTGAAGCCGTGCGGGCCGGGGTTGGTCACCGCCGAGGCCGGTCCCGGCAGGCTGGC
GGCAATGGCGCCGAGCACCAGCACGCCGACAGGCATCACCAGCAGGGTGAAGACCAGCAGGCGGACCTCCTT
CGCCTCGAGCTTCTTGCCCAGGTACTCCGGCGTCCGCCCGACCATCAGGCCGGCGAGGAACACCGCGATCAG
GACGAACAGCAGCATGCCGTAGAGGCCGGCGCCGACGCCGCCGAAGATCACCTCGCCGAGCATCATGTTCAG
CAGCGGCAGCATGCCGCCCAGGGGGCTCAGGCTGTCGTGCATGGCGTTCACCGAGCCGTTCGAGGCGGCGGT
GGTGGTGATCGCCCAGAGCATGCTGGCGGCGGTGCCGAAGCGACTCTCCTTGCCCTCCATCGGTGCGCCCTG
CTCGACCGGCAACTGCGCCAGCGCCGGGTTCGGCTGGTATTCGGCCCACAGCGACAGGCTCAGGCCGAGGCA
GAACAGCAGCAGCATGCAGCCGAGGATCGCGCGGCTCTGGCGCAGGTCCTTCACGTAATGGCCGAAGGTGAA
TACCAGCGCCGCCGGGATCAGGATGATCGAGGCCACTTCGAACAGGTTGCTCCAGGCACTCGGGTTCTCGAA
CGGATGAGTCGAGTTGACGCCGAAGAAGCCGCCGCCGTTGGTGCCCAGTTGCTTGATGGCGATCTGGCTGGC
CGCCGGGCCGAGCGGGATGGTCTGCTCGGCGCCTTGCAAGGTGGTGGCATGGACGTAGTCGAAGAAGGTCTG
CGGCACGCCCTGCCAGACCAGCAGCAGCGCCAGCAGCAGGCACAGCGGCAGCAGCACGTAGAGGGTGCCGCG
GGTCAGGTCGACCCAGAAGTTGCCCAGCTGTCGTGTGGAGCGGCGGCTGATGCCGCGCGCCAGGGCCACCAG
CACGCAGAGGCCGACCGCCGCGCTGACGAAGTTCTGCACCGTGAGGCCGACCATCTGGCTGAAGTAGCTCAG
CGAGGCCTCGCCGCTGTAGGCCTGCCAGTTGGTGTTGGTGACGAAACTGACCGCGGTGTTGAACGCCAGGGT
CCATTCCAGGCCCGGCAGGTGCTGCGGGTTCAGCGGCAGGCTGCCCTGCAGCATGAGGATCGAGAACAGCAG
GACCAGGCCGGCCAGGTTGAATGCCAGCAGCGCCAGGGTGTAGGTCTTCCAGTCCTGCTCGCTCGCCGGATC
GACGCCGAACAGGCGATAGCAGACGCGCTCCAGTGGCGCCAGCGGCGCGCTGAGGAGATTGCGTTGGCCTTC
CATCACCTTGAAGCAGTAGCGCCCGAGGAACGGTGCAGGCACCAGGACCAGGGCGAAAAAGGCCAGGATCAA
GAGAATCTCGTGGCTGTTCATGTGCCCTCCCCTAGGCACGGTCGGCGCGTAGCAGCGCCACCAGCAAATAGA
CGAACAGTCCCGTGGCCAGGGCCAGGGACAACCAATCCAGAACGGTCATGTGTGCGATCTCTCCTTCGAACG
GCCTCTGCCGCTTGA