ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5746

TrivialName: PA14_43560

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_43560

PAO1 Ortholog Locus:

Sequence Length: 1473

Protein Length: 490

Start: 3878304

Stop: 3879776

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAN65827.1|AE016211_5 (AE016774) alginate regulatory protein AlgP [Pseudomonas putida KT2440] Identities = 76/310 (24%), Positives = 127/310 (40%), Gaps = 31/310 (10%)

Sequence:

GTGCGGCAACACCACCTTGCTGTGCCGCCCGCGCACCATCGCCAGCGGCACCTGCAACTGCCGCGCACGCCC
CGGACTGCTGTGCGGCACGCTGCGGTAGATGCTGATCTCGGTGGCCGGATCGAAGCGCAGGCGCAGGCCGGA
ACCGCCGCCGCTGTCGGCCAGCCCGTGGCGTACGTAGGCCTCCAGGCAATCGGGGTCGAAACGGCGGAACAG
CGCCTTGCCGGAGAAGTAGGCCCGCGCCTCTTCCAGGTCGGGGAACGCCTCGCGACGCCCCAGGGTGCGCCC
GGCCGGAGTGATCCGGTCGATGAAGCCGAAGCGCTTGGCGGCACGGATCACCAGGCGGTCGGCGAGGGTCAG
CACCGGCGAATCGAGCATCACCACGCCGCGGTAGAGTTCCGGCCGGCGCAGCGCCGCGTGGTAGTGCAGCAC
GCCGCCGAGGGAATGGCCGACGCCCCAGACCGGCTGTTCCAGGCTGGCGAGATGGTGCAGCAGTTCGTCCAC
CAGGTTGTCCCAGTTGTCGTTCACCGGGAAACGCGGGTCGTGCCCGTGCATTTCCAGGTGATCCACCCGGTA
CTCCGGCGCCAACGCCTCGAACAGCTTGGCGTAGGTAGCCGACGGGAAGCCGTTGGCGTGGGCGAAGAAAAC
CGATTGCGACATGCGCGACGTCTCGACAGGGCTGATGCCAGGGATTCTCCGGCAGCCTCGCCGAGGCGGCAA
TGGCTTTGCCGGCTGCCTTGCACGGCGAAGCGGCCAAAACCTCAGGCAGAGCGGACGAGATGCTCGAGGATC
GCCGCCGCCACCAGCAGGAACACCACCCCGCAGGCCGCGTCCAGCCAGGGCACCGCGCGCAACAGGCGGGCC
TGCAGGGCCGGGCGGGTAAGGGTCAGGCTGAGCAGGCCGAACCAGCAGGCGCCCATGCCGAACAGCAGCGCC
GCCACCGCCAGCTTGCCGCCGAGCGACATCTGCGCAGGAATCAGGCTGCCGAGCAAGGCGATGAAGAACACC
AGCGCCTTGGGATTGAACAGATTGGTCGCCACCCCACGCAGCCAGGGCCCCAGGGGCGACGGCGGCAGCGCC
CCGTCGAGCCGGCCCGGCTGGCCGTCGCCGCGCCGCAGCCAGGCGCGCAGCGCGCCGACGCCGAGCCAGGCC
AGGTACAGCGCGCCGAGCGCCTGCAGGATGGCGAACAGCACAGGCGTACGGCTGAGCAGCAGCGACACGCCG
gtCAGCACCAGGGTGGTATGCAGgaaaatCCCGCAGGCCAGCCCCAGCGCGCTGGCCAGGCCGGCCCGCCGC
CCCTGGTGCAGGGACGTGCGCACCACCAGGGCGACATCGGGACCGGGGCTGACCAGGGCGACGGCGAACACC
GCCGCCAGGGTCAGCAAGACAGACAATTCCTGCATGGCTACTCCACGAAAAAGGGATCGGAAAGGAAAACGC
GATTCAGCGCTGGCGCAGGCGCGCCGGCGGTAA

Translation:

MRQHHLAVPPAHHRQRHLQLPRTPRTAVRHAAVDADLGGRIEAQAQAGTAAAVGQPVAYVGLQAIGVETAEQ
RLAGEVGPRLFQVGERLATPQGAPGRSDPVDEAEALGGTDHQAVGEGQHRRIEHHHAAVEFRPAQRRVVVQH
AAEGMADAPDRLFQAGEMVQQFVHQVVPVVVHRETRVVPVHFQVIHPVLRRQRLEQLGVGSRREAVGVGEEN
RLRHARRLDRADARDSPAASPRRQWLCRLPCTAKRPKPQAERTRCSRIAAATSRNTTPQAASSQGTARNRRA
CRAGRVRVRLSRPNQQAPMPNSSAATASLPPSDICAGIRLPSKAMKNTSALGLNRLVATPRSQGPRGDGGSA
PSSRPGWPSPRRSQARSAPTPSQARYSAPSACRMANSTGVRLSSSDTPVSTRVVCRKIPQASPSALARPARR
PWCRDVRTTRATSGPGLTRATANTAARVSKTDNSCMATPRKRDRKGKRDSALAQARRR*

AnnotationID:5748 GeneID:5746

AnnotatorUID: diggins

Modification Date/Time: 2005-02-27 10:10:32

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:15624

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28623