ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5745

TrivialName: PA14_43590

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_43590

PAO1 Ortholog Locus:

Sequence Length: 1398

Protein Length: 465

Start: 3879807

Stop: 3881204

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAB75380.1| (AL939113) conserved hypothetical protein SCC88.10c [Streptomyces coelicolor A3(2)] Identities = 102/409 (24%), Positives = 145/409 (35%), Gaps = 75/409 (18%)

Sequence:

GTGCGCCTGGTCGTAGAAACCGAACTGCTGGGCCACCTGGCTCAACGGCTGCTCGCCGCGCAGTACCAGCGG
CAAGGCGCGCTCCAGACGCAGTTGGGTCAGCCACTGGTGGGGCGGCAGGCCACAGTGACGGCGGAAGCGCCG
CAGCGCCTGCCAGGGGCTCAGGCCGCAGAAGGCGGCCAGTTCCTCCAGGTTCGGCGGGTACTCCAGGCGCGA
CTCCAGCCAGTCGCGCAGCCGCGTCCAGTCGCGCTGGCCGAAGCCTTCCCGGTCGCCCTCCTCCAGGCGCAG
GCTGCTGCCCAGGCTGAGCAGGCAGGCCAGCGCCTGCCAGAGGTGCTCTTCCAGGGCCAGACGGTTCTCCAG
CGCCGCCGCTCCGCCGAGCATGCCCAGGTGCAACTGACGCAGGCGCTGCTGCAGACGCTCGTCGCGGACCAG
GCTGCTGGTCAGGCGCGGCGCCCCCCGGCGGCCGTCGCTGAAGTCGCGGCTGGCGCGCTCCAGCCAGTCGGC
ATCGAGCGCCAGGACGCGGATACGGTAGCCCTCCTCGCCGGCGCTGCTGCCGTCGTGGATGCTTTCCGGCGC
CATCAGCAACGCGTCGCCGGCCCCGGCCAGGCGCCGTTCGCCGCCGGCGGCATAGCGATGCCGGCCCTGCAG
CAGCAAGCCGATGTGGTACTCCAGGTGGAAGTGCCGGGGAAAGGAAAAGCGGTTGTGCTCGGCGTCGATCAG
GCGTACGCCGGGAATCCCGCTGCTGAGATGGGTGATCTGCTCCATCCCGCTACTCTACCGCCAGCGGGACGG
AACGATCTTGGACAAAATTGCGGACCGCGCTCAGCCCGCCCTGCCCGCCAGCGGCACCACCGCCATGGTCAG
GCGGGCGATGCAGCTCGGCTTGCCGTCGTCGCCACTGAGGCGGATGTCCCAGACATGGGTGGTACGCCCCAG
GTGGATCGCCCTGGCCACCGCAGTGACCCGGCCGCTGCGCAGGCCGCGCAGGTGGTTGGCGTTCACTTCCAG
GCCGACGCAGTAGTACTGGCTGGTGTCGACGCACAGGTAGCTGGCCATCGAGCCCAGGCTTTCCGCGAGGAC
CACCGAGGCGCCGCCGTGCAGCAGGCCGAACGGCTGGTGGGTACGCGAGTCGACCGGCATGCTGGCGGTCAG
CGACTCGTCGTCGAAGGCTTCGAAGCGGATGCCAAGCAGGTCGCCGATGCTGTTCTTCTGCGAGGCGTTCAG
TTGCTCCAGGTCGGGCGTTTGTCGCCAGAGGCTCATGGGAATTCCTTGCGCAAGGGGGAAGCCCGGAAGGGC
TTCCCGTCGGTGGGAGTCATTCGTGCCAGAGCACGGCCTCGCGGCGTTCCACCCATTCGTGGAAGCGCGAGC
CATAGGCACCTTCCACCATATTGCGCTTGA

Translation:

MRLVVETELLGHLAQRLLAAQYQRQGALQTQLGQPLVGRQATVTAEAPQRLPGAQAAEGGQFLQVRRVLQAR
LQPVAQPRPVALAEAFPVALLQAQAAAQAEQAGQRLPEVLFQGQTVLQRRRSAEHAQVQLTQALLQTLVADQ
AAGQARRPPAAVAEVAAGALQPVGIERQDADTVALLAGAAAVVDAFRRHQQRVAGPGQAPFAAGGIAMPALQ
QQADVVLQVEVPGKGKAVVLGVDQAYAGNPAAEMGDLLHPATLPPAGRNDLGQNCGPRSARPARQRHHRHGQ
AGDAARLAVVATEADVPDMGGTPQVDRPGHRSDPAAAQAAQVVGVHFQADAVVLAGVDAQVAGHRAQAFRED
HRGAAVQQAERLVGTRVDRHAGGQRLVVEGFEADAKQVADAVLLRGVQLLQVGRLSPEAHGNSLRKGEARKG
FPSVGVIRARARPRGVPPIRGSASHRHLPPYCA*

AnnotationID:5747 GeneID:5745

AnnotatorUID: diggins

Modification Date/Time: 2005-02-27 10:10:21

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15622

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28621