ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5741

TrivialName: PA14_43860

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 10:10:23

LocusName: PA14_43860

PAO1 Ortholog Locus:

Sequence Length: 1302

Protein Length: 433

Start: 3907230

Stop: 3905929

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD55362.1| (AL939124) probable translational initiation factor [Streptomyces coelicolor A3(2)] Identities = 110/363 (30%), Positives = 132/363 (36%), Gaps = 72/363 (19%)

Sequence:

GTGGGGTTACGGCAGCCTTTTCCCGCCGGTGGCGCTGGCCTATATCGGCGTGCACTGGCGTACGGCGCGCAA
GGGCGTCGGGCTGGCCGCGCTGGGTTGCATCCCGCTGGTGGTCGGCCTGGCGCTGCTGGCCAGTCACGACGC
TGCGCGACTGGAGGCGATCCTCAGCCTGCGCTGGCTGAAGCCGGAGGCCAGGCCGCCGGCGGAACTGGCCAT
CGCGCTCAGCGGGGAGTTCAACGGCAAGCCTTTCGCGCCGCAGAGCGGCGAGTTGATCGGCGGCGTGCTGAG
CCTGCGCCAGGGGCACGATTTCTACGCCCAGCGCGAGCTGCAGATCCGCCTTCCGGCACAGCCGCTCGGGGC
GCTGCGCCTGGACGTGCTGCCCGAGGACGGCGGCGCGTTGCCAGAAGTCGAGCTGAGCTGGCTGCAACCGGA
GCAGGACCTGCCCGAGGCGCGTCGTCTCCTGCGTCGCTATACCTTGCACCTGGACCTGCGGCCCAAGGCGCC
GAACCGCCTGGAGGGCGAGTTCCACCTGAGCCTGCCGAGCGACTACCGGACCACCCTCAGCGGCCACGTCGA
GCTATATACCGACCGGCTGCGCTATCGGCACGGCAAGGTCGACCTGGGCTACGACTCCGACGATACCCTGGC
CCTGGTCTTGCGCGACTATCTGCAGCGGCGCTTCGCCAGCCGCGACGTCAGCCTCGTGCGGGCGCCGTCCTG
GCGCGCGGCCAGCCATGCGCGGCCGCTGCGTATCGAGGCCCTGGTGGCCGGCCAGACTCAGGTGCTGGAGCT
GACGCTGGAGAAGAACGCCCGGCGGGAGTGGACGGTGCGCGGCGACGCGTTCCCCGCCTTGCCGGCGGAGCC
TGCGACCGTGGCCGCGGCGGCGCCGCCCGAGCCGCAGGCGCTGCCGGCGCCGGGCAACGCCACCCTCGACCT
GGAGCTGGTCCAGGTCGAACCGCAGCGCTACAGCCAGCGCCTGGTCAAGGCCACTACGGTACGCGGGCGTAT
CGCCGAGGGCCGTTTCACCGGCCTCGACAGCGAGGGGCGCCTGGTGATCCGCCGGGAAATGCCCGGTGCGGG
GGAGGCGAGCTACCTGTTGCACCCGGCGGAGATCGCCCGTCTCGAACTGCTCGAACGCTAGTCGTCGCACGA
CGGTGCGCGGTTTTTTCGCATAAGCGCTTGAAAAGCCGGAAGAAGGCCCCACCTAGGGGACATCCGCCGTGG
TACGCGGCTTATGTCATTGATGGAGCTTGGAGCGATGAGCGTGGAAACCCAAAAAGAGACACTGGGCTTTCA
GACTGA

Translation:

MGLRQPFPAGGAGLYRRALAYGAQGRRAGRAGLHPAGGRPGAAGQSRRCATGGDPQPALAEAGGQAAGGTGH
RAQRGVQRQAFRAAERRVDRRRAEPAPGARFLRPARAADPPSGTAARGAAPGRAARGRRRVARSRAELAATG
AGPARGASSPASLYLAPGPAAQGAEPPGGRVPPEPAERLPDHPQRPRRAIYRPAALSARQGRPGLRLRRYPG
PGLARLSAAALRQPRRQPRAGAVLARGQPCAAAAYRGPGGRPDSGAGADAGEERPAGVDGARRRVPRLAGGA
CDRGRGGAARAAGAAGAGQRHPRPGAGPGRTAALQPAPGQGHYGTRAYRRGPFHRPRQRGAPGDPPGNARCG
GGELPVAPGGDRPSRTARTLVVARRCAVFSHKRLKSRKKAPPRGHPPWYAAYVIDGAWSDERGNPKRDTGLS
D*

AnnotationID:5743 GeneID:5741

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 10:10:44

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:15616

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28613