ViewGene

Locus Name:
GeneID:
Location:

GeneID: 5732

TrivialName: PA14_44330

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_44330

PAO1 Ortholog Locus:

Sequence Length: 1557

Protein Length: 518

Start: 3948684

Stop: 3947128

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAM37943.1| (AE011953) PilL protein [Xanthomonas axonopodis pv. citri str. 306] Identities = 62/240 (25%), Positives = 82/240 (34%), Gaps = 31/240 (12%)

Sequence:

ATGCTCGGCTCCTCAGGCGATCTGTGCGGCGGCTTCGTATTCGGCCGGCTTGGCGGCACTGACGGTGCGCCA
GGTGTTGTAGGCCATCAGGAACATGCCGAGCAGGAAGATGAAACCGCCGAGCATGCGCACGATGAAGCCGGG
GTGGCCGGCGGCCAGCGCTTCGACGAAGGAGTAGGTCAGGGTGCCGTCCTCGTTGACCGCGCGCCACATCAG
GCCCTGGGTGATGCCGTTGACCCACATCGAGGCGATGTAAAGCACGGTACCGATGGTGGCCAGCCAGAAGTG
CGCGTTGATCAGGCCCAGGCTGTACATCTTCTCGCGGCCGAAGACCTTCGGGATCAGGTGGTAGAGCGAGCC
GATGGAAACCATCGCGACCCAGCCGAGGGCGCCGGCGTGTACGTGGCCGATGGTCCAGTCGGTGTAGTGGGA
GAGGGCGTTGACGGTCTTGATCGCCATCATCGGGCCTTCGAAGGTGGACATGCCGTAGAAGGCCAGGGACAC
CACCAGGAAGCGCAGGATCGGGTCGCTGCGCAGCTTATGCCAGGCGCCCGAGAGGGTCATCATGCCGTTGAT
CATGCCGCCCCAGCTCGGCGCCAGGAGGATCAGCGACATCACCATGCCCAGCGACTGTGCCCAGTCCGGCAG
CGCGGTGTAGTGCAGGTGGTGCGGGCCGGCCCAGATGTACACCGCGATCAGCGCCCAGAAGTGGACGATGGA
CAGGCGGTAGGAATAGACCGGACGCTCGGCCTGCTTGGGCACGAAGTAGTACATCATGCCGAGGAAGCCGGC
GGTGAGGAAGAAGCCCACGGCGTTGTGCCCGTACCACCACTGGACCATGGCGTCGGTGGCGCCGGCGTACAG
CGAGTAGGACTTGGTGAAGGTCACCGGCAGCTCGAGGTTGTTCACCACGTGGAGCATGGCGACGGTGAGGAT
GAACCCGCCGAAGAACCAGTTGCCCACATAGATGTGCTTGACCTTGCGCTTGACCAGGGTGCCGAAGAACAC
CACCGCGTAGGCGACCCAGACCACCGTGATCAGGATATCGATCGGCCACTCCAGCTCGGCGTACTCCTTGGA
CGAGGTGTAGCCCAGCGGCAGGCTGATGGCGGCCAGCAGGATCACCAGTTGCCAGCCCCAGAAGGTGAAGGA
GGCGAGGGTGTCGGAGAACAGTCGCACCTGGCAGGTGCGCTGCACCGCGTAGTAGCTGGTGGCGAACAGTGC
GCAACCGCCGAAGGCGAAGATCACCGCGTTGGTGTGCAGCGGGCGCAGGCGGCCGAAGCTCGTCCACGGCAA
GCCGAAGTTCAGGTCGGGCCATACCAGCTGGGCGGCGATCAGGACACCGACGGTCATGCCGACGATGCCCCA
GACCACGGTCATGATGGCGAATTGGCGGACCACCTTGTAGTTATAGGCGGACTCTGGGTTAGTGGTGCTCAT
GCTATGGGCTTCCATCCACGGTTATACGCTATGGCTTTTTCCGGCAGTTGGGATGCCGGGCGTCCCCCCATT
GGGGCTGGTCTAATTGGCGTAATTAGCGAGAGGAAGCATGGATAA

Translation:

MLGSSGDLCGGFVFGRLGGTDGAPGVVGHQEHAEQEDETAEHAHDEAGVAGGQRFDEGVGQGAVLVDRAPHQ
ALGDAVDPHRGDVKHGTDGGQPEVRVDQAQAVHLLAAEDLRDQVVERADGNHRDPAEGAGVYVADGPVGVVG
EGVDGLDRHHRAFEGGHAVEGQGHHQEAQDRVAAQLMPGAREGHHAVDHAAPARRQEDQRHHHAQRLCPVRQ
RGVVQVVRAGPDVHRDQRPEVDDGQAVGIDRTLGLLGHEVVHHAEEAGGEEEAHGVVPVPPLDHGVGGAGVQ
RVGLGEGHRQLEVVHHVEHGDGEDEPAEEPVAHIDVLDLALDQGAEEHHRVGDPDHRDQDIDRPLQLGVLLG
RGVAQRQADGGQQDHQLPAPEGEGGEGVGEQSHLAGALHRVVAGGEQCATAEGEDHRVGVQRAQAAEARPRQ
AEVQVGPYQLGGDQDTDGHADDAPDHGHDGELADHLVVIGGLWVSGAHAMGFHPRLYAMAFSGSWDAGRPPI
GAGLIGVISERKHG*

AnnotationID:5734 GeneID:5732

AnnotatorUID: diggins

Modification Date/Time: 2005-02-25 11:11:23

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:11406

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:28595