ViewGene

Locus Name:
GeneID:
Location:

GeneID:5724
TrivialName: PA14_44790
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_44790
PAO1 Ortholog Locus:
Sequence Length:1524
Protein Length:507
Start: 3993928
Stop: 3992405
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK23765.1| (AE005853) hypothetical protein [Caulobacter crescentus CB15]
Identities = 86/333 (25%), Positives = 114/333 (34%), Gaps = 59/333 (17%)
Sequence:
GTGCGCCATCCCGCCCATCATCAGCATGGCCACGTAGATCAGCGCGCCGGCGGTGGCGAAGGCGGGGATCAT
CCCGGCCAGCGGGGCGAAGAACATCGCGGCGACGAACAGCACGCCGACCACCACCGCGGTGAGCCCGGTACG
TCCGCCGGCGGCCACGCCCGCGGCGCTCTCCACGTAACTGGTCACCGGCGGGACACCGAGCATGCCGCCGAA
CACGCTGGAGGCGCTGTCGGCCTTCATCGCCTTCGACAGGTTCTCGATACGTCCGTCCTCCTTCACCAGGTG
CGCGCGCTGGGCGACGCCCATGAGAGTGCCGGCGGTATCGAACATGTGCACGAAGAGGAAGGCCAGGATCAC
GCTGATCATGGTGACGTTGAACGCGCCGGCGATGTCCATCGCCAGGAAGGTCGGCGCCAGGCTCGGCGGCGC
CGAGAACACCCCGCCGTACTGCACCAGGCCGAGGGCCCAGCCGACCAGGGTGACGCTGAGGATGCTGATGAG
GATGCCGCCGAACACCCGGCGGTACTCGAGCACGGCGATCATCAGGAAGCACAGTGCCGCCAGCAGCGGGCC
GGGCGAGGTGAGGTGGCCGAGCTTGATCAGGGTCGCCGGGCTGGCCACTACGATGCCGGCGGTCTTCAGGCC
GATCAGGCCGAGGAACAGGCCGACACCCGCGCCCATGGCGAACCTGAGGCTGCGGGGGATGCTGTTGAGCAG
CCATTCGCGGACCCGGGAGAAGGTCAGCAGCATGAACATCACCCCGGAGATGAACACCGCGCCGAGGGCGAT
CTGCCAGCTGTAGCCCATGGTGCCGACCACGGTGTAGGTGAAGAAGGCGTTCAGCCCCATTCCCGGCGCCAG
GCCCACCGGCCAGTTGGCGTACAAGCCCATCAGGAAGCAGCCGAGGGCGGCCGCCAGGCACGTGGCGACGAA
CGCCGCGCCGTGGTCGATGCCGGCGTCGGCCATGATGTTGGGATTGACGAAGATGATGTAGGCCATGGTGAT
GAAGGTGGTCAGCCCGGCCGCCAGCTCGGTCCTGACCGTCGTACCATGCTGGCGGAGCTTGAACAGGCGTTC
GAGCAGGCCGGTGGCGGGCGGTGTCGCAGCGTAGATCCCTTGTTCTTCTTGTTTGGTGCTTTCCACAGCAGG
TACTCCTCATCGCTCTTGTTGTTAGGTCCTGCGGGCCGGTTGGTTACCAGATCCCTGACGCGGCTCGAAGGT
GATGTGAGGGCACGATTTTCTGACCTTTGGGTCAAGAACTCGTGCGAGCGATTATGCCTTTGTATACAAAAA
GGTCAAAGAATGTTTGAGGGTGTTTCGCCACATTTTTATCAGCTTTCCGTCACGCGTCCTTCCGGGCGGTGC
CGCGCGCTCGGAACGAGGGGCGGAAAGGGGTGGTGCGCCGGATGCCGCTGCTTGTGTACACTATTTCGCTAT
CAGCCGCCGGCGTGCCTCACCCACGCCCGTGAGCCAGGATCAGCCCAGGCCACAAGCCGGACGCACAAGGTT
CGAGACCGATGA
Translation:
MRHPAHHQHGHVDQRAGGGEGGDHPGQRGEEHRGDEQHADHHRGEPGTSAGGHARGALHVTGHRRDTEHAAE
HAGGAVGLHRLRQVLDTSVLLHQVRALGDAHESAGGIEHVHEEEGQDHADHGDVERAGDVHRQEGRRQARRR
REHPAVLHQAEGPADQGDAEDADEDAAEHPAVLEHGDHQEAQCRQQRAGRGEVAELDQGRRAGHYDAGGLQA
DQAEEQADTRAHGEPEAAGDAVEQPFADPGEGQQHEHHPGDEHRAEGDLPAVAHGADHGVGEEGVQPHSRRQ
AHRPVGVQAHQEAAEGGRQARGDERRAVVDAGVGHDVGIDEDDVGHGDEGGQPGRQLGPDRRTMLAELEQAF
EQAGGGRCRSVDPLFFLFGAFHSRYSSSLLLLGPAGRLVTRSLTRLEGDVRARFSDLWVKNSCERLCLCIQK
GQRMFEGVSPHFYQLSVTRPSGRCRALGTRGGKGWCAGCRCLCTLFRYQPPACLTHAREPGSAQATSRTHKV
RDR*
AnnotationID:5726GeneID:5724
AnnotatorUID: diggins
Modification Date/Time: 2005-02-25 07:07:31
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:15597
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:28579
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 48726How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 959981Stop: 961504
Length: 1524
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCGCCATCCCGCCCATCATCAGCATGGCCACGTAGATCAGCGCGCCGGCGGTGGCGAAGGCGGGGATCAT
CCCGGCCAGCGGGGCGAAGAACATCGCGGCGACGAACAGCACGCCGACCACCACCGCGGTGAGCCCGGTACG
TCCGCCGGCGGCCACGCCCGCGGCGCTCTCCACGTAACTGGTCACCGGCGGGACACCGAGCATGCCGCCGAA
CACGCTGGAGGCGCTGTCGGCCTTCATCGCCTTCGACAGGTTCTCGATACGTCCGTCCTCCTTCACCAGGTG
CGCGCGCTGGGCGACGCCCATGAGAGTGCCGGCGGTATCGAACATGTGCACGAAGAGGAAGGCCAGGATCAC
GCTGATCATGGTGACGTTGAACGCGCCGGCGATGTCCATCGCCAGGAAGGTCGGCGCCAGGCTCGGCGGCGC
CGAGAACACCCCGCCGTACTGCACCAGGCCGAGGGCCCAGCCGACCAGGGTGACGCTGAGGATGCTGATGAG
GATGCCGCCGAACACCCGGCGGTACTCGAGCACGGCGATCATCAGGAAGCACAGTGCCGCCAGCAGCGGGCC
GGGCGAGGTGAGGTGGCCGAGCTTGATCAGGGTCGCCGGGCTGGCCACTACGATGCCGGCGGTCTTCAGGCC
GATCAGGCCGAGGAACAGGCCGACACCCGCGCCCATGGCGAACCTGAGGCTGCGGGGGATGCTGTTGAGCAG
CCATTCGCGGACCCGGGAGAAGGTCAGCAGCATGAACATCACCCCGGAGATGAACACCGCGCCGAGGGCGAT
CTGCCAGCTGTAGCCCATGGTGCCGACCACGGTGTAGGTGAAGAAGGCGTTCAGCCCCATTCCCGGCGCCAG
GCCCACCGGCCAGTTGGCGTACAAGCCCATCAGGAAGCAGCCGAGGGCGGCCGCCAGGCACGTGGCGACGAA
CGCCGCGCCGTGGTCGATGCCGGCGTCGGCCATGATGTTGGGATTGACGAAGATGATGTAGGCCATGGTGAT
GAAGGTGGTCAGCCCGGCCGCCAGCTCGGTCCTGACCGTCGTACCATGCTGGCGGAGCTTGAACAGGCGTTC
GAGCAGGCCGGTGGCGGGCGGTGTCGCAGCGTAGATCCCTTGTTCTTCTTGTTTGGTGCTTTCCACAGCAGG
TACTCCTCATCGCTCTTGTTGTTAGGTCCTGCGGGCCGGTTGGTTACCAGATCCCTGACGCGGCTCGAAGGT
GATGTGAGGGCACGATTTTCTGACCTTTGGGTCAAGAACTCGTGCGAGCGATTATGCCTTTGTATACAAAAA
GGTCAAAGAATGTTTGAGGGTGTTTCGCCACATTTTTATCAGCTTTCCGTCACGCGTCCTTCCGGGCGGTGC
CGCGCGCTCGGAACGAGGGGCGGAAAGGGGTGGTGCGCCGGATGCCGCTGCTTGTGTACACTATTTCGCTAT
CAGCCGCCGGCGTGCCTCACCCACGCCCGTGAGCCAGGATCAGCCCAGGCCACAAGCCGGACGCACAAGGTT
CGAGACCGATGA